Campylobacter vulpis: CVULP_0342
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Entry
CVULP_0342 CDS
T08642
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cvu
Campylobacter vulpis
Pathway
cvu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cvu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CVULP_0342 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvu03021
]
CVULP_0342 (rpoC)
03400 DNA repair and recombination proteins [BR:
cvu03400
]
CVULP_0342 (rpoC)
Enzymes [BR:
cvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CVULP_0342 (rpoC)
Transcription machinery [BR:
cvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CVULP_0342 (rpoC)
DNA repair and recombination proteins [BR:
cvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CVULP_0342 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QNF77392
LinkDB
All DBs
Position
325872..330425
Genome browser
AA seq
1517 aa
AA seq
DB search
MSKFKVIEIKEENRPRDFEAFQLRLASPERIKSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGVKMKDLERVLYYEAYIVENPGEAYYDNENSKKVEFCDVLNEEQYQSLMQR
YENTDFKARMGGEVVRDLLANLDLVALLNQLKEQMQATNSEAKKKTIIKRLKVVENFLNS
NINANIDSEDAVPNRPEWMMITNLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNTR
LKKLIELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRF
RQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLLAKLEEKGYATTVKQAK
KMIENKTNEVWECLEEVVEGHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFN
ADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKSVTVPSQDMVLGIYYLSLEKV
GAKGAHKICTGIDEVVMAMESNCLDIHANIQTIIDGRKCATTAGRLIIKSILPDFVPENM
WNKVLKKKDIAALVDYVYKQGGLKITASFLDKLKNLGFEYATKAGVSISIADIIVPNEKQ
KAIDAAKKQVREIQNSYNLGLITSGERYNKIIDIWKSTNNILSKEMMELVQKDKEGFNSI
YMMADSGARGSAAQISQLAAMRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKG
LADTALKTANAGYLTRKLIDVAQNVKITTYDCGTHEGIEINEITADSSIVETLEERILGR
VLAEDVIDPITNFVLFAEGALIDEEKARVLTESGIKSVNIRTPITCKAKKGICAKCYGVN
LGEGKLVKPGEAVGIISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYN
LKTYKNKEGKSIVANRRNAAILLVEPKIKAPFKGTISIESIHEDVIVSIKDKKKEAKFIL
RKYDLAKPNELAGVSGNIDGKLYLPYQNGALVNENESIVEAIKEGWNVPNRIPYASEILV
NDGDPIVQDIKAGEKGTLKFYILKGDGLDRVRKVKKGDIVKEKGFFVVIADENDHESKRH
YIPRESKIEFDDSAVIDDVNAIIASAAKKDKSVIAEWDAYNNAIIAEIDGVVSFEDIEAG
YSADEQLDEATGKRSLVINEYLPSGVRPTLLIAGKGDKTVRYQLEPKTVIFINDGDKVSQ
ADILAKTPKAVAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
EAEDGSSAEYLIDKAKHIQVRDGEFIHAGEKLTDGLISSHDVLKILGEKALHYYLISEIQ
QVYRGQGVVISDKHIEVIVSQMLRQVRVVDSGHTKFIEGDLVSRRKFREENEKIVKMGGE
PAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRIIP
VGTGLYGEQNLKLKEQE
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttaaagtaatagaaatcaaagaagaaaaccgaccaagagattttgaagct
tttcaattaagactagctagccctgaaaggattaagtcttggtcttatggagaggttaaa
aagcctgaaacgattaattaccgcactttaaagcctgaaagagatggacttttttgtgcg
aaaatttttggaccgattcgagattacgaatgcctttgtggtaagtataaaaaaatgcgt
tttaagggcgtaaaatgtgagaaatgtggcgttgaagttgcaaattcaaaagtgcgtcgc
tctagaatgggacacatagagcttgtaacgccagtagcacacatttggtatgtcaattcc
ctcccaagtcgtataggaactttgcttggcgttaagatgaaggatttagaacgtgtgctg
tattatgaagcgtatatcgtggaaaatcctggcgaggcttattatgataatgaaaattcc
aaaaaagtcgaattttgtgatgttttgaatgaagagcagtatcaaagcttgatgcaacgc
tatgaaaataccgattttaaagcaaggatgggcggcgaagtcgtgcgagatttactcgca
aatttagatttagtggctcttttaaatcagcttaaagaacaaatgcaagcgacaaattct
gaagccaagaaaaagacaattatcaaacgcttgaaagtggtggaaaatttcttaaattct
aacatcaatgctaatattgacagcgaagatgcggtgccaaatcgccctgagtggatgatg
attacaaatttgcctgttttgccacctgatttgcgtccgcttgttgctttagatggaggc
aaattcgcggttagtgatgttaatgacttgtatcgccgcgtgattaatagaaacacaaga
cttaaaaaactcatcgagcttgacgcacctgaaattattattagaaatgaaaaaagaatg
ttgcaagaagccgttgatgccctatttgataatggtcgtcgtgcaaatgctgtcaaggga
gcaaacaaaagaccacttaagtctttgagtgagattattaagggtaagcaagggcgtttt
agacaaaatttgttgggaaaaagggtggatttttctggtcgtagtgttattgttgtggga
cctaagcttagaatggaccagtgtggtttgcctaaaaaaatggctttagaacttttcaaa
ccacatcttttagccaagcttgaagaaaagggctatgcgactactgttaagcaggctaaa
aaaatgatagaaaataaaacaaacgaggtttgggaatgccttgaagaggtagttgaagga
catcctgtaatgcttaaccgtgccccaactttacataaactttctatacaagcttttcac
cctgttttggtcgagggtaaggcgattcagttgcaccccttagtgtgtgcggcgtttaat
gcggactttgacggggatcaaatggctgtgcatgtgcctctttctcaagaagccattgct
gagtgtaaggttttaatgctttcttctatgaatattcttctaccagcgagtggaaaatcc
gtaacagtgccttctcaggatatggttttgggaatttattatctttctttagaaaaagtg
ggtgcaaaaggagcgcataaaatttgcacaggtattgatgaggttgtaatggcgatggag
tcaaattgccttgatattcatgcaaatatccaaaccattatcgatgggcgtaaatgtgcg
actacggctgggcgtttgattatcaagtccattttgcctgattttgttcctgaaaatatg
tggaataaggtgctaaagaaaaaagacatcgccgctttggtcgattatgtttataagcaa
ggtggtttaaaaattactgcaagtttcttagataagcttaagaatctaggttttgagtat
gcgactaaagcgggtgtttctatctccatagctgatattatcgtgccaaatgaaaagcaa
aaggctattgatgccgctaaaaaacaggtaagagaaattcaaaattcttacaatctaggc
ttaatcacttcaggtgaaagatataataaaatcatcgatatttggaaaagcacgaataat
attttatcaaaagagatgatggagcttgtgcaaaaggacaaagagggctttaattctatt
tatatgatggcagatagtggtgcaagaggtagtgcggcacaaatttcgcaacttgccgca
atgagaggtttgatgactaagcctgatgggagcattattgaaacgcctattatttcaaat
ttccgtgaaggacttaatgtgcttgagtattttatctctacgcacggtgctagaaagggg
cttgccgatacagctcttaaaacggcaaatgctgggtatttgacaagaaaactcatcgat
gtggcacaaaatgttaaaattacaacttatgattgtggcacacacgagggcattgagatt
aatgaaatcactgccgatagttctatagtagagaccttggaagagagaattttgggtagg
gttttggctgaagatgtgattgaccctattacaaattttgttctttttgctgagggagct
ttgattgacgaagagaaagctagggtgcttactgaaagtgggattaagagtgtgaatatc
cgcactcctatcacttgtaaggctaaaaaaggaatttgtgcgaagtgttatggggtaaat
cttggcgagggtaagcttgtcaagcccggtgaggcagtgggaattatctcagcacaatct
atcggtgagccggggactcagctgacccttagaacttttcatagtggtggaacggctagc
acggatttgcaagatagacaagtgagcgcacaaaaagagggttttataagattttataat
cttaaaacctataaaaataaagagggtaaaagtatagtcgcaaatcgtagaaatgcggca
attttacttgttgagcctaaaattaaagctccatttaagggaactattagtatagaaagc
atccacgaagatgtgattgtgtcgattaaagataagaaaaaagaggcgaagtttatacta
agaaaatacgaccttgctaaaccaaatgagttagctggtgtgagtggaaatatagacgga
aagctttatttgccatatcaaaatggtgctttggttaatgaaaatgaaagtatagtcgag
gcgattaaggaggggtggaatgtgcctaatcgtatcccttatgcgagtgaaattttggtt
aatgatggcgatcctatcgtgcaagatattaaagcgggcgaaaaaggaactttgaaattt
tatatccttaaaggcgatgggcttgatagagtgcgtaaggttaaaaagggcgatatagtc
aaagaaaaaggtttttttgttgtgattgcagatgaaaatgaccacgagtcaaaaagacat
tatatccctagagagtctaaaatagaatttgatgatagtgcggtgatagatgatgtcaat
gccattattgcaagtgcggcgaaaaaagataaaagtgtgattgctgagtgggatgcgtat
aataatgctatcatagcggagattgacggcgtggtaagttttgaggatattgaggcaggt
tatagtgcagatgagcaacttgacgaggcgactggaaagcgttctttggtgattaatgag
tatttaccaagtggtgtgcgtcctaccctactcatagcggggaaaggggataagactgtg
cgttatcagcttgagccaaagacggtcatttttatcaacgatggcgataaggtttcgcaa
gcagatattttagctaaaactcctaaggcggtggctaagtctaaggatattacgggcggt
ttgccgcgtgtaagtgagctttttgaagcgagaaagcctaaaaatgctgctgtgatagcg
gagattgacggcgtggtgcgttttgataaacctttgcgttcaaaagagagaattatcatc
gaggctgaagacggctcaagtgccgagtatctcatcgataaagccaagcatatccaagtg
agagatggcgaatttatccacgcaggcgaaaagcttacagacggcttaatctcaagccac
gatgtgcttaagattttaggcgaaaaagctttgcattattatcttataagcgaaattcag
caagtgtatcgtgggcaaggcgttgtgatttctgataagcatattgaggtgattgtctct
caaatgttaagacaggtgagagtggttgatagtgggcatacgaaatttattgagggagat
ttagtttcacgccgcaaatttcgcgaagaaaatgaaaaaatcgttaaaatgggcggagaa
ccagccatagcagaacctgtgcttttaggggtaactagagcagccataggaagcgatagt
gtcatctcggcagcctctttccaagaaacaaccaaggtgctaaccgaagcaagtatagcg
ggtaaatttgactacttggaagacttaaaagaaaatgtcattttaggtcgcattatccct
gttggaacaggactttatggtgagcaaaatttaaaacttaaagaacaagaatag
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integrated database retrieval system
