Crocosphaera watsonii: CwatDRAFT_2033
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Entry
CwatDRAFT_2033 CDS
T05097
Name
(GenBank) ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cwa
Crocosphaera watsonii
Pathway
cwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CwatDRAFT_2033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwa03019
]
CwatDRAFT_2033
03400 DNA repair and recombination proteins [BR:
cwa03400
]
CwatDRAFT_2033
Enzymes [BR:
cwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CwatDRAFT_2033
Messenger RNA biogenesis [BR:
cwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CwatDRAFT_2033
DNA repair and recombination proteins [BR:
cwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CwatDRAFT_2033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Terminase_5
UPF0122
HTH_11
GerE
HTH_28
HTH_38
HTH_23
DUF6115
HTH_24
Motif
Other DBs
NCBI-ProteinID:
EAM48734
UniProt:
Q4BXV1
LinkDB
All DBs
Position
complement(6215..8347)
AA seq
710 aa
AA seq
DB search
MVSQFNSLENALKDHFGYDQFRPGQKQIITEALNNKDLLVIMPTGGGKSLCFQLPALLKP
GLCIVVSPLIALMQDQVDSLLDNGIGATFLNSTLSREQLKSRENSILNGKIKLLYVAPER
LLNDSFLNFLDFLNQKIGLSSFAIDEAHCVSAWGHDFRPEYRQLKQLRFRYPTVPVVALT
ATATKRVREDIIEQLGLEKPSVHLASFDRPNLYYEVQQKSRRSYAQLLNYIRSQEGSGIV
YCLSRKNVETVAFRLQQDGIEALPYHAGMYDDERATNQTRFIRDDVRIIVATVAFGMGIN
KPDVRFVVHYDLPRNLESYYQESGRAGRDGEPANCALFLSFGDLKKIDYLIDQKSSPKEQ
KIARQQLRKVVDYAEANECRRTIILRYFGQQHNGNCENCDNCKNPKPIEDWTIEAQKFLS
CVARCQERFGMTHIIDVLRGSRKKKIEKYGHHLLSTYGIGKERSTEEWKMLGRSLIHQGF
VNETSDGFSVLKLNKYSWEIFRNERKVEIAVTESLSSKELNDYNPRKAESDLLLDKLRQL
RKHLADQNRIAPYVIFADSSLRLMAQIKPQTIEAFKNISGVTAYKAQQYGDSFVSVIREF
CQQQSLPTPLPTNTNMATLQLYQQGLSVPEIAERRNLKQTTIYGHIADLIEMNQPIDVDS
FVSEHKKALIIKCIQTIGDGALNPLKNHLGDDYSYGEIKLVRAWYRRENK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggtatctcagtttaattcattagaaaatgccctcaaagatcactttggttacgatcaa
tttcgtcctggtcaaaaacagattattactgaagctttaaataataaagatttattggtt
attatgcccacaggaggcggaaagtctttatgttttcaacttcccgcattactcaaacct
gggttatgtatagtggtatcacctctcattgctttaatgcaggatcaagttgattcttta
ctagataatggtatcggagcaacttttttaaatagtaccttaagtcgggagcagttaaag
tcaagagaaaattctatcttaaacggtaagataaagctgttatatgtggcaccagaacga
ttgttaaatgacagttttttgaactttttagattttttaaaccaaaaaatcggtttatct
agttttgccatcgatgaagctcattgtgtctctgcttggggtcatgattttagaccagaa
tatcggcaattaaaacaattaagatttcgctatccaactgttcccgtagtcgctttaact
gcaacagcaactaaacgggttagagaggatataattgaacaattaggattagaaaaaccc
tcggtgcatctggctagttttgatcgccctaacttatactacgaagtgcagcaaaaatca
agaagaagttatgctcaactattaaattatattcgcagtcaagaaggttcaggaattgtt
tattgtttaagtcggaaaaatgttgaaacagttgcgtttagactacaacaggatggaatt
gaggctttaccctatcatgctggaatgtatgatgatgagagagctactaatcaaacccgt
tttattcgggatgatgtgagaattattgtggcaactgttgcctttggcatgggaattaat
aaacccgatgttcgctttgttgttcattacgatttgcctagaaatttagaaagttattat
caagaatctggccgcgcaggaagggatggagaacctgcaaattgtgctttgtttttaagc
tttggtgatctgaaaaaaattgactatttaatcgaccaaaaaagtagcccaaaagaacaa
aaaattgctcgtcaacagttacgtaaagtagtagattatgcagaagcaaatgaatgtaga
aggacgattattttaaggtattttggacaacaacataacggtaattgtgagaactgtgat
aattgtaaaaatcctaaacctattgaagattggactattgaagcacaaaagtttttatcc
tgtgttgcccgttgccaagaaagatttggcatgactcatattatcgatgtattaagagga
tctagaaagaagaaaattgaaaaatatggacaccatttgttatcaacctatggtataggt
aaagaaagaagtacagaagaatggaagatgttaggacgctcattaatacatcaaggtttc
gttaatgaaaccagcgatggattttctgttttaaaattgaacaaatatagttgggaaatc
tttagaaatgagcgaaaagtagaaattgctgtaacagagtctttaagttcaaaagaatta
aatgattataatcccagaaaagcagaaagtgatttattgttggataagttaagacagtta
cgcaaacatttagccgatcaaaatcgtattgcaccctacgttatttttgcagattctagt
ttaagattaatggcacaaattaaacctcaaaccatagaagcatttaaaaatatttctgga
gtaactgcttataaagcgcaacaatatggagatagttttgtttcggtaattagggaattt
tgtcaacagcaaagtttacccactcccttacctactaataccaatatggcaaccttacag
ttgtatcaacaagggttgagtgttccagaaattgccgagagaagaaacttaaaacaaact
actatttatggacatattgctgacttaatagaaatgaatcaacctattgatgttgatagc
tttgtttcggaacataaaaaagccctgattattaaatgtattcaaaccattggagatggt
gcgttaaaccctttaaaaaatcatttaggagatgattatagttatggagaaataaaatta
gttcgtgcttggtatcgacgagaaaataagtaa
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integrated database retrieval system
