Crocosphaera watsonii: CwatDRAFT_2160
Help
Entry
CwatDRAFT_2160 CDS
T05097
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cwa
Crocosphaera watsonii
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cwa03016
]
CwatDRAFT_2160
Enzymes [BR:
cwa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CwatDRAFT_2160
Transfer RNA biogenesis [BR:
cwa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CwatDRAFT_2160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
AsnRS_N
Motif
Other DBs
NCBI-ProteinID:
EAM49365
UniProt:
Q4BZP1
LinkDB
All DBs
Position
4627..6639
AA seq
670 aa
AA seq
DB search
MEKGKLIEFRLNGEYRLAVVDRPEGKKDWMVIDGQGNSHKLRPQRVDYEVPGGPYNSDEI
SQFLQEIQPYLDPSNLEIAWELLVEDGEGVTAADLASFIYSEQTPQFCYAAHRLLSEDKI
YFKKKGDNYEPRSPSQVEEIKHQLEVQQQRQQEKEIFFEHIQQAMAGEGVEWTQSDRSRL
ESLEKFVLQPEQSHRNAQDLLKELGHKTIPDSAFELLVALKWWSPNENLFLKRSSYPVNF
PQKVLDVASSSVQTLPPDADGDRLDLTRLKVYTIDDESTEEIDDGLSVEYLENDQVKLWI
HIADPTRLVTPGDELDLEARKRSTTLYLPTGMISMFPLELAAGPMSLCQGQLCAALSFGV
ILDSEGAVVDYSIHASLIKPTYRLTYHDVDEMLQLGITAEAELAVLAEAAKKRHQWRQSQ
GSITIKMPEAIIKVKSDEEISIELLETSISRQLVAEMMILAGEVAGTYCGEHGIPVPFRG
QPQPELPPEEELLLLPPGPVRACALRRCMPRSEMGTLPSRHASLGLDSYTQVTSPIRRYT
DLLTHFQIKAHLRGDELPFALDVMQQILYSVTLSAQEASFLERQTNRYWGLEFLRRNADE
VWQGLVLRWLREDEGLGVILLEELGLELPHRFERSVSLGDRLNVQVSRSDPHRDEIRFRE
MLESESVINQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaggtaaattaattgaatttagactcaatggagaatatcgtctggcagtagtt
gatcgtccagagggaaaaaaagattggatggttattgacggccaaggtaattcccacaaa
ctacgaccccaacgagtggattatgaagtgccagggggcccatacaatagcgatgagatt
tctcaatttctccaagaaattcaaccttaccttgatccatctaatttagaaatagcctgg
gaattattagtagaagatggtgagggggtaacagcagcagacttagccagctttatctat
tccgaacaaacgccacaattctgttatgcggcacatcgcttactatctgaggataaaata
tattttaagaaaaaaggagataattatgaaccccgttcccccagtcaagtagaggaaatt
aaacatcaactagaagttcaacaacaacggcaacaagaaaaagaaatcttttttgagcat
attcaacaagcaatggccggggaaggggtagaatggactcagagcgatcgcagtcggtta
gaatcattagaaaaatttgtcttacaaccagagcaaagtcatcgtaatgctcaagactta
ctcaaggaactaggacacaaaacaatccctgattcagcttttgaattactcgtggctttg
aaatggtggagtcccaacgaaaacctctttttaaagcgaagctcttatcctgtcaatttt
cctcaaaaggtgttagatgtggcttcttcttctgtacaaaccttacccccagatgctgat
ggcgatcgcttagacttgacccgtctaaaagtctatactattgacgatgaaagtacagaa
gaaattgacgacggtttgagtgttgagtatctagaaaacgatcaagtcaagttatggata
cacatcgccgatcccacccgtttagtgactccaggggatgagttagacttagaagcgagg
aagcgcagtacaaccctttatctacccacagggatgatctccatgtttcctctggagttg
gccgcaggacccatgagcttatgtcaaggtcaactctgtgcggctttaagctttggggtt
attttagatagtgagggtgctgttgtggattattctatccatgccagtctcattaaacca
acctatcgcctcacctaccatgatgtggatgaaatgctacagttgggcattaccgccgag
gcagagttagcagtattggcagaagcagctaaaaaacgacaccagtggcgacagtctcag
ggttctatcaccatcaaaatgccagaagctattattaaggtgaagtctgatgaagaaatt
agtattgaattattagaaacatctatttctcgtcaattagtggcggaaatgatgatttta
gccggagaagttgcaggaacttattgtggtgaacatggtatacctgttccctttagagga
caacctcaaccagagttacctccagaagaagagttattattattgcctcctggccctgtg
agggcttgtgctttgcgccgttgtatgcctcgtagcgaaatgggaaccctgcccagtcgt
catgctagtttaggcttagatagttatactcaagtaacttctcctattcgtcgttataca
gatttattgacccattttcaaattaaagcccatctgaggggggatgagttaccttttgct
ttggatgttatgcagcaaattttatatagtgttactctttctgctcaagaagcgtctttc
cttgaacgacaaacaaaccgttattggggtttagaatttttacgccgtaacgctgatgaa
gtttggcaagggttagttttacgctggttacgggaagacgaagggttaggggtgatcctc
ttggaagaattagggttagaattacctcatcgttttgagcgatcggtatctttgggcgat
cgccttaatgtacaagtcagtcgttccgatcctcaccgtgatgaaattcgcttccgtgag
atgcttgaatctgagagcgtaatcaatcaataa
DBGET
integrated database retrieval system
