Crocosphaera watsonii: CwatDRAFT_2688
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Entry
CwatDRAFT_2688 CDS
T05097
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cwa
Crocosphaera watsonii
Pathway
cwa03420
Nucleotide excision repair
cwa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CwatDRAFT_2688
03430 Mismatch repair
CwatDRAFT_2688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cwa03400
]
CwatDRAFT_2688
Enzymes [BR:
cwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CwatDRAFT_2688
DNA repair and recombination proteins [BR:
cwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CwatDRAFT_2688
MMR (mismatch excision repair)
Other MMR factors
CwatDRAFT_2688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
RNA_pol_I_A49
AAA_30
DEAD
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
EAM49773
UniProt:
Q4C0T6
LinkDB
All DBs
Position
complement(10356..12722)
AA seq
788 aa
AA seq
DB search
MENNINSTSHLSVPNLSIKLEELRNSLRPGQQQLASWTAGKMAISAVPGAGKSHSLAVAA
AMMIAQYRLHPRKQLIIVTYTRSAAAGIKAKIKERLKELKIPQTGFMVQTLHGLALNIAT
RNPDLSQLNLETSTVIIPTPSHRVIRSSVEKWISGNPRRYQLLLEGAEFDGEETERLRRQ
SVLRTEVLPKLAHTIIREAKSSGLNPEKVWELSDYSQEHYQILAIAAGLYEQYQIVMRSL
DFIDYDDMILGALNVIENPKIRQVWQQQIFAVFEDEAQDSSPLQEKLISALASKENDCNL
IRVGDPNQAINSTFTPADSVYFNWFCETCKSQEKLAEMTQAGRSSKIIIDAANFVLKWVN
GQWEYESKKQRKKHINSDISEDKKEVIPFRLQSIETVSKDDPQPNANPEAVGEGLELYRP
DDIYHTVDLIKERIIELLNKNSDHNAAILVRENRQGRFLAENLKELPKKHKIRVYEVGES
ERFSQIPSEILNLLQFIDRPHSPDYLKNALEILQNRGLIPSQDLNILATYPENFLYPSSL
IPEQKKPVLEARRYCCNLLQAKLELPDYQLIPFLGMTLKYTGAELATVQKLSERISQELV
GKFSLKSVLNVLREIINSEQFEGIEEDSEERYTRQNQVTIITMHKSKGLDWDYVFLPFLH
EDVLPGNPWVPTAAKFLGEFTLAEVSRAQIRAAVHHQYINPENTLIIPNPDNAWQEAQQL
KKAEEYRLLYVAMTRAKRLLWMSAAKEGPFRWSVFKADTSINLHSKVPCPIFPILMKQFP
NSVIEYLF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaataatattaattcaacttctcatctgtcagttcctaacctatcaataaaatta
gaggaactacggaatagtttacgtcctggacaacaacaattagccagttggacagcggga
aaaatggccatttctgcagtgcctggtgcggggaagtctcacagtctagctgtagctgct
gctatgatgatagcacagtatagacttcaccctagaaagcagctaattattgttacttat
actcgctctgctgctgctggaattaaggcaaaaattaaagaacgtctcaaggagctaaaa
atacctcaaactgggtttatggtacaaactttacacggtttggccttgaatattgctact
cgtaaccctgacttatctcaactcaatttagaaacatcaacggtgattattcctacccct
agtcatcgggtgattcgtagttccgtagaaaagtggattagtggcaatcctcggcgttat
caactattattagaaggggcagagtttgatggagaagaaacagaaagattacgccgtcaa
tctgtattgagaacggaagttttaccaaagctggctcataccattatcagagaagctaaa
agttcaggattaaacccagaaaaagtctgggaattaagtgattattcccaggaacattac
caaatattagccattgcagcagggttatacgaacaatatcaaattgtcatgcgatcgcta
gattttattgattacgatgacatgattttaggggcattaaatgttatagaaaatccgaaa
attagacaggtgtggcaacaacaaatttttgcggtatttgaagatgaggcacaagattct
agtcctttacaagagaaacttatttctgctttagcaagtaaagaaaatgactgtaattta
attagagtaggtgatcctaatcaggcgattaactctacatttacccctgctgattctgtt
tattttaattggttttgtgagacctgcaaaagtcaagaaaaattagcagaaatgacccaa
gctggacgcagtagtaagattattattgatgcagctaactttgttttaaaatgggtcaat
gggcaatgggaatatgaaagtaaaaaacagcggaaaaaacatattaattctgatatttca
gaagataaaaaagaggttattccttttcgcttacaaagcatagaaactgttagcaaagat
gatcctcaacctaatgctaaccccgaagcagttggggaaggattagagctttatcgtccc
gatgatatttatcatacggttgatttaattaaggaaagaatcattgaattattaaacaaa
aattctgaccataatgctgctattttagtcagagaaaatcgtcaaggtcgtttcttagct
gaaaacctgaaagagttacctaagaaacacaaaattagagtttatgaagtgggggaatca
gaaagattttctcagattcctagcgaaattttaaacctcttacaattcatagatagaccc
cattctcccgactatttaaaaaatgccttggaaatattacaaaatcggggtttaattcct
tcacaagaccttaatattttagctacttatcccgagaattttctttatcccagttcccta
attcctgaacagaaaaaaccagtattagaagcacgtcgttattgttgtaatctcctccaa
gcaaagttagaattacccgattatcaactgattccatttttaggaatgaccttaaaatat
actggtgcagaattagcaacagtccagaaactttctgagagaattagtcaagaattagtt
ggtaaattttccttaaaaagtgtcttaaatgttctcagagagattattaattcagaacag
tttgaagggatagaagaagatagcgaagaacgttatacaagacagaatcaagtaaccatt
attaccatgcacaaatccaaaggtttagactgggattatgtctttcttcctttcctccat
gaagacgttttaccgggtaatccttgggttcccactgctgcaaaattcttaggagaattc
actttagcagaagtatctcgcgcgcaaattcgtgctgcggttcatcatcaatatattaac
ccagaaaacaccttaattattcctaacccagacaacgcttggcaagaagcacaacaactt
aaaaaagcagaggaatatcgcttactttatgtagcaatgactcgtgcaaagcgtctttta
tggatgtctgctgcgaaagaaggcccctttcgttggagtgtttttaaagcagatacaagc
attaatttacacagtaaagttccttgtcctatttttcctattttaatgaaacaatttcct
aattcggttattgaatatttgttttga
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integrated database retrieval system
