Crocosphaera watsonii: CwatDRAFT_3452
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Entry
CwatDRAFT_3452 CDS
T05097
Name
(GenBank) Conserved hypothetical protein MG423
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cwa
Crocosphaera watsonii
Pathway
cwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CwatDRAFT_3452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwa03019
]
CwatDRAFT_3452
Messenger RNA biogenesis [BR:
cwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CwatDRAFT_3452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
EAM50308
UniProt:
Q4C2C7
LinkDB
All DBs
Position
complement(1949..3730)
AA seq
593 aa
AA seq
DB search
MSKTKQQPSLKIIPLGGLHEIGKNTCILEYKEEIILVDAGIAFPTDEMHGVNIVLPDMTY
LRENRHKIKGMIATHGHEDHIGGIPHHLKQFDIPIIYGPKLAMALVKDKLDEAGLSDRTK
LQTVGPRETVKVSPSFSVEFIRNTHSMADSFTIAIQTPLGVVIHTGDFKIDHTPVDGEHF
DLQKLAEYGEKGVLCLLSDSTNAEVPGSTASESSVYPNLDRIIAQAGGRLMITTFASSVH
RVNIILQLAQKHKRKVAVVGRSMLNVIAHARELGYVKCPDDIFISLKAANNLPDEQVLIL
STGSQGEPLAALTRISRGAHRHLKVRPGDTIVFSANPIPGNTIAVVNTIDRLMMQGANVI
YGRRHGIHVSGHGCQEDHKLMLALTRPKFFVPVHGEHRMLVKHAEIGYKMGVPADNIVII
DNGDIVELSTEKISVKGKVPSGIKLVDQAGVVHEHVMQDRQQLAEDGVVTVAAPISWEGK
LITPPEVHLRGVVTKVEPSLLKQLIIRAIENILENRWDEFSNSDRSAKVNWSYLQKEVEK
TLQRLVKRELRSYPLVIFILQTPETPSPTAPEPTPNSNRKVYRRRRPTASTAS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaccaaacaacaacctagcctaaaaattattcccttagggggactgcacgaa
atcggcaaaaacacctgtatattagagtataaagaggagattatcctggtcgatgcaggt
attgcctttcccacagatgaaatgcacggggttaatattgtcctccccgacatgacctat
ttacgagaaaatcgccataagataaaagggatgattgccactcacggtcatgaggatcat
attggcggtattccccatcatttgaagcaatttgatatccctataatctatggtccaaaa
ctggccatggccttagttaaagataaattagacgaagcaggactcagcgatcgcacaaaa
ctacaaaccgttggtccgagagaaacggtgaaggttagtccttctttttccgtggaattt
atccgcaatacccactccatggccgatagtttcaccatagccattcagactcctttaggg
gtggtgatccacacaggggacttcaagattgatcatacccccgtagatggagaacatttc
gacctgcaaaagttagccgaatacggggaaaaaggagttctctgtttactcagtgactcc
accaacgccgaagttcccggcagtaccgcctcagaaagctcggtttatcctaacttagac
cgcattattgcccaagcaggaggacggttaatgatcaccacctttgcatcttcggtgcat
cgggtcaatattatcttacagttggcgcaaaaacataagcgcaaagtggctgtggtagga
cgttccatgttaaacgtcatcgcccatgccagggaattaggctatgttaaatgtcctgat
gatatctttatttccctcaaagcggccaataacttaccagacgaacaagttttaatctta
agcacagggtcacaaggggaacccttagccgccttaacccgtatttccagaggggcccat
cgtcatctgaaagtacgtccaggggataccattgttttctctgctaaccccattccaggt
aataccatcgccgttgttaatacaattgatcgcttgatgatgcaaggggcaaacgtcatt
tatggccgtcgacatggtattcatgtttctggtcacggttgccaagaagaccataaatta
atgttagccttgactcgacctaagttctttgttcctgttcatggggaacaccgaatgttg
gttaaacacgcagagataggttataaaatgggagttcctgcggataatattgtcattatc
gataacggtgatattgtagaactgtccacagaaaagatatctgtaaaaggaaaagttccc
tccggcatcaagttagtggatcaagcaggtgtggttcatgaacacgttatgcaggatcgt
cagcaacttgctgaagatggggtggttacggtagcggcccccattagttgggaaggaaaa
ttaatcactcctcctgaagttcacttacgaggtgtggtgacaaaggtggaaccctctttg
ctcaaacaactaattattcgggcgatcgagaatattctcgaaaaccgttgggatgagttt
tcaaacagcgatcgcagtgcaaaggttaactggtcttatttacaaaaagaggttgaaaaa
accttacaaagattggtcaaacgggaattacgcagttatcccttagtcatctttatccta
caaaccccagaaactccttcccctactgcacctgaacctacccccaactctaaccgtaaa
gtttaccgtcgtcgtcgtcctaccgcttctacggcttcttaa
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