Crocosphaera watsonii: CwatDRAFT_3590
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Entry
CwatDRAFT_3590 CDS
T05097
Name
(GenBank) Helix-turn-helix, Fis-type
KO
K03090
RNA polymerase sigma-B factor
Organism
cwa
Crocosphaera watsonii
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cwa03021
]
CwatDRAFT_3590
Transcription machinery [BR:
cwa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CwatDRAFT_3590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_r3
AbiEi_4
HTH_24
HTH_8
Sigma70_ECF
HTH_10
HTH_23
HTH_Crp_2
HTH_1
Motif
Other DBs
NCBI-ProteinID:
EAM50564
UniProt:
Q4C329
LinkDB
All DBs
Position
complement(10931..11713)
AA seq
260 aa
AA seq
DB search
MTHYNQASKNKHLNSIELLSAYARNPSLELRNQLVECNLGLVRQVAHRISNQCSEPYEDL
EQIGYLGFIRAIERFNPQQGCAFSSFDIPYIRGEMLHYLRDKGSVMRIPRRWQELHNKGK
KIRKQLTASLKRSPFDWEIAEALMIPLEEWNECQLALQNRLLVSLDATISHNMDCSLSFG
DTLPDQHYQAKQRLEEDRLQLQRALGQLEDKTKAAIECVFLNELPRKEAAKQIGISPMTV
TRHLKKGIQQLGSLLEPQVA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgactcactataaccaagccagtaagaataaacatctaaatagcatagagcttttgagt
gcttatgcccgtaatccttccttagagttacggaatcaattagtagagtgtaatttaggg
ctagtgcgtcaagttgcccatcgtattagtaaccaatgctcagaaccctatgaagattta
gaacaaattggttatttaggttttattcgtgctatcgagcgttttaatcctcaacagggt
tgtgcctttagttcttttgatatcccctatattcgtggggaaatgctccattatcttcgg
gataaaggtagtgtaatgagaattcctagacggtggcaagaacttcacaataaaggtaaa
aaaatacgtaagcagttgacagctagtttaaagcgttctccttttgattgggaaatcgca
gaagctctgatgatccccttagaagaatggaatgaatgtcaattagcactgcaaaaccgt
ctcttagtcagtctagatgcaaccattagccacaatatggattgttcccttagttttggg
gataccttgcccgatcaacattatcaagcgaaacaacggttagaagaagatcgcctacaa
ttacaacgggctttgggccaactggaggacaaaaccaaggccgctatcgaatgtgtcttt
ttgaatgaacttccccgtaaagaagcagccaaacagattggtattagccccatgacggtg
acacgccatctcaaaaaaggaattcagcagctaggctctttattagaaccccaagtggct
tag
DBGET
integrated database retrieval system
