Crocosphaera watsonii: CwatDRAFT_4423
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Entry
CwatDRAFT_4423 CDS
T05097
Name
(GenBank) similar to Phytoene dehydrogenase and related proteins
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
cwa
Crocosphaera watsonii
Pathway
cwa00906
Carotenoid biosynthesis
cwa01100
Metabolic pathways
cwa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CwatDRAFT_4423
Enzymes [BR:
cwa01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
CwatDRAFT_4423
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Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Pyr_redox_2
Thi4
GDI
FAD_binding_3
GIDA
GMC_oxred_N
Lycopene_cycl
Pyr_redox
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
EAM51267
UniProt:
Q4C545
LinkDB
All DBs
Position
complement(59012..60532)
AA seq
506 aa
AA seq
DB search
MTRTGTAIAKQDYDVIVIGSGMGGLVTATQLAAKGAKVLVLEKYLIPGGSAAYFEREGYR
FDVGASMIFGFGTEGTTNLLTRALEGVNMSMETIPDPVQIHYHLPNNLELKVHKNYGKFI
EELTAKFPHEKIGIRRFYDECWQVFNCLNAMELLSLEEPRYLMRVFFQHPFACLGLVKYL
PQNAGDIARRYISDPELLKFIDMECYCWSVVPAGKTPMINAGMVFSDRHYGGINYPKGGV
GTISEKLVEGLEKFGGEIQYKARVTNILMEQGKAVGVRLADGKEYRAKRIVSNATRWDTF
EKLLTNNPLPKKEEKWQQRYEKSPSFLSLHLGVKSEVLPIGTECHHVLLEEWETMEDEQG
TIFVSIPTLLDPSLAPPGHHIIHTFTPSYINEWEGLSKQEYSQKKEAAASHLIKRLEKIF
PGLVDGLDYQEVGTPRTHRRFLGRNDGTYGPIPSRKLPGLLGMPFNRTVIPGLYCVGDST
FPGQGLNAVAFSGFACSHRIAVDLGI
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgactaggacaggaacggcgatcgcaaaacaagactacgatgttatcgttatcggttcg
ggaatgggggggttagtgacagctacccaactcgcagccaaaggagcgaaagtattggtc
ttagaaaagtatttaattcctgggggaagtgccgcttattttgaacgggaaggttatcgc
tttgatgtaggtgcatcgatgatttttggttttggcacagaaggaaccactaacctttta
acccgtgctttagagggggttaatatgagtatggaaaccatccccgaccctgtacaaata
cattaccatttacctaacaatttagagctaaaagtacacaaaaattatggtaaatttatc
gaagaattaacggctaagtttcctcatgaaaagataggtattcgtcgcttttatgacgaa
tgctggcaagtttttaactgcctaaatgccatggaattactttccttagaagaacctaga
tacctgatgagagtattttttcagcacccttttgcttgtttagggttggtgaaatactta
ccccaaaatgcaggagatattgctcgtcgttatatcagtgatcccgaactactaaagttc
attgatatggagtgttattgttggtcagtggttccggcaggaaaaacacctatgatcaat
gcaggaatggtgttttcagatcgacattatgggggtataaattatccgaaagggggtgtg
ggaactatttccgaaaaattagtcgaaggtttagaaaaatttggtggtgaaattcaatat
aaagcccgtgttactaatattttaatggaacagggtaaagcagtgggagttagattagcc
gatggcaaagaatatagggcaaaacgtattgtttctaatgccactcgttgggatacattt
gaaaaattattgaccaacaatccactccctaaaaaggaagaaaaatggcaacaacgttat
gaaaaatcccctagtttcttaagcttacatttaggggttaaatctgaagttttacccata
ggaacagaatgccatcatgttcttttggaagaatgggagactatggaagatgaacaagga
accatttttgtctcaattcccaccctactcgatcctagtttagcccctcctggtcatcac
attatccatacatttactcccagttatattaacgaatgggaaggactatctaaacaagaa
tattctcagaaaaaagaagcagcagctagtcatttaattaaacgcttagaaaagatattt
cctggattagttgatggtttagactatcaagaagtgggaacaccacgcactcatcgacgc
tttttagggcgaaatgatggtacttatgggcctattcccagtcgtaagttaccagggttg
ctaggaatgccttttaaccgcaccgttattcctggattatactgtgtaggagatagtacc
tttccaggtcaaggactcaatgctgtggccttttctgggtttgcttgtagccatcgcatc
gccgttgatctaggaatataa
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