Crocosphaera watsonii: CwatDRAFT_5036
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Entry
CwatDRAFT_5036 CDS
T05097
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cwa
Crocosphaera watsonii
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cwa03016
]
CwatDRAFT_5036
Enzymes [BR:
cwa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CwatDRAFT_5036
Transfer RNA biogenesis [BR:
cwa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CwatDRAFT_5036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DHR-2_Lobe_A
MCD_N
ZNHIT3_C
Motif
Other DBs
NCBI-ProteinID:
EAM52005
UniProt:
Q4C6G3
LinkDB
All DBs
Position
313334..313978
AA seq
214 aa
AA seq
DB search
MTDSSEKSNNFQVCDRDLSSETLERYLKADALAIDTETMGLVPQRDRLCLVQLCDPSGYV
TAIRIERGQTEAPNLKQLLENKNIVKIFHYARFDVGQFKYNFSVETDPIFCTKVASKLAR
TYTGSHGLKSLVQELEGVELDKSSQSSDWGNSQNLSEAQLSYAANDVRYLIQLREQLITM
LKREERWEIAQKCMKVIPLFVELDLMYYKDIFDH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcttcagaaaaaagtaacaattttcaagtttgcgatcgcgatctttcctca
gaaaccctcgaacgttatttaaaggccgatgccctggcaattgatacagaaactatggga
ttagttccccaaagagatcgactctgtttagtgcaattatgtgatccgagtggttatgtc
acagccattcgtattgaaagaggacaaacagaagcacccaatctaaaacaattattagaa
aataaaaatattgtcaaaatatttcattatgcacggtttgatgtaggtcaatttaagtat
aatttctctgttgaaaccgacccaattttttgtacaaaagtagctagtaaattagcaaga
acctatacaggatctcatggtttaaaatcattagtacaagaattagaaggagtcgaacta
gataaaagttcccaaagttctgactggggaaatagtcagaacttatcagaagcacaatta
agttatgcagccaacgatgttagatatttaattcaactaagagaacaactaataaccatg
ttaaaaagggaagaaagatgggaaattgctcaaaagtgtatgaaagttattccccttttt
gtagaattagacttaatgtattataaagatatttttgaccattga
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