Crocosphaera watsonii: CwatDRAFT_5134
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Entry
CwatDRAFT_5134 CDS
T05097
Name
(GenBank) Twin-arginine translocation pathway signal
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cwa
Crocosphaera watsonii
Pathway
cwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CwatDRAFT_5134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cwa02000
]
CwatDRAFT_5134
Transporters [BR:
cwa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CwatDRAFT_5134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
EAM51889
UniProt:
Q4C6S9
LinkDB
All DBs
Position
complement(193987..195150)
AA seq
387 aa
AA seq
DB search
MLTRRSFLTTTGILALGHLLSSCASSGADLRVLLLKGSVPPQLLKLFRQEISSGSSLDFK
PQGQLKELFSLLETWQDKDEENKGLLADLPQIPLINPPPPSISDFVTLGDVWLGEAIEKE
LIDPLDIAEIENWQTLPSRWKNLVKRDRQGNLQENGLIWGAPYRWGTTLIAYRSDKLDWQ
PQDWSDLWDERLSDRISMVNQPREIIGLTLKQLGKSYNTENLEEVPELKSELLNLNKRVK
YYSDQHYLQPLVVGDVWVSVGWSNEIIPLMAKSPNIKAVVPTSGTAIWSDIWVKPKAKET
ETELSEIAKQWLNFCWQPQAARLMSLFADAASPVINTIDKDELEPDITNNPLLFIDSAIF
DKCDFLEPLSKQSKEQYINLWKEVRNS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcttacccgtcgttcttttctcaccactacaggaattttagcattaggacatctttta
tcaagttgtgctagttctggtgctgatttacgggtattattgttaaagggttctgttccc
cctcaattgcttaagctttttcgtcaagaaatctcttcaggatcatctcttgattttaaa
cctcaaggccaattaaaggaactgttttctttgttagaaacctggcaggataaagatgag
gaaaacaaaggtttattggcagatttaccccaaatacccctaattaatcctccacctcct
tctattagtgattttgtgactttgggagatgtttggttaggggaggccattgaaaaagag
ttaatcgatcccttagatatagctgagattgaaaattggcaaactctaccttctcgctgg
aaaaatttagttaaacgggatagacaagggaatttacaggaaaatggcttaatttggggc
gcaccttatcgttggggaactactttaatagcttatcgctctgataaactggactggcaa
ccccaagattggtctgatttatgggatgagcgattaagcgatcgcatttctatggtaaac
caacccagagaaattattgggttgactttgaaacagctaggaaagtcttacaacacagaa
aatttagaggaagtacctgagttaaaaagtgaacttttaaacctcaataaacgagtaaaa
tattatagcgatcaacattatttacaacctttagtggtgggggatgtttgggtaagtgta
ggatggtctaatgaaattattcccttgatggctaaaagtcctaatattaaagcagtcgtt
cccacttctgggactgctatttggtcagatatttgggtaaaaccaaaagcaaaagaaaca
gaaacagaattatctgaaattgctaaacaatggcttaatttttgctggcaacctcaagca
gctaggttgatgtctttgtttgctgatgctgcctctcctgtgatcaatacaatagataaa
gatgaacttgagcctgatattactaataatcctttgttgtttattgactcagctattttt
gacaaatgtgattttttagaacctttatccaaacaaagtaaagaacaatatattaacctt
tggaaagaagtgagaaacagttaa
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