KEGG   Crocosphaera watsonii: CwatDRAFT_5396
Entry
CwatDRAFT_5396    CDS       T05097                                 
Name
(GenBank) Helix-turn-helix, Fis-type
  KO
K03090  RNA polymerase sigma-B factor
Organism
cwa  Crocosphaera watsonii
Brite
KEGG Orthology (KO) [BR:cwa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cwa03021]
    CwatDRAFT_5396
Transcription machinery [BR:cwa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CwatDRAFT_5396
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r4_2 Sigma70_r3 HTH_24 Sigma70_ECF HTH_3 HTH_23 KORA HTH_Crp_2 SpoIIID HTH_28 HTH_Tnp_ISL3 HTH_17 HTH_11 HTH_8 HTH_30 Trp_repressor HTH_50 HTH_AsnC-type TnsD MOV-10_Ig-like UPF0122 HTH_10 HTH_Tnp_4
Other DBs
NCBI-ProteinID: EAM52287
UniProt: Q4C8I4
LinkDB
Position
265066..265485
AA seq 139 aa
MRQEFREKFNRQPTDSEIAQVLEISLKEWQEIKLAFQNREPVSLDVKISNGGEGQTSLGE
LVPDINYRSFQLAQEDQIRLQQALGQLEEKTRNILEFVFLKDLTQRETAEQLGISVVTVS
RRVKKGLEVLKSNMGKEIC
NT seq 420 nt   +upstreamnt  +downstreamnt
gtgcgccaagaatttagagaaaaatttaaccgtcaaccaacggattcagaaattgctcaa
gtcctagaaatttctttaaaagaatggcaagaaattaaactagcttttcaaaatagagaa
ccagtgagtttagatgttaaaattagtaatggtggagaagggcaaaccagtttaggagag
ttagttcctgatatcaattatcgcagttttcaactagcacaagaagatcaaattcgtctc
caacaagccttaggacaattggaagaaaaaacgagaaatattcttgaatttgttttcctc
aaagacctaacccaaagagaaacagccgaacaattaggaattagtgtagtcacggtttcc
cgtcgtgttaaaaaagggctagaagtactcaaaagtaatatgggtaaggagatatgttga

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