KEGG   Crocosphaera watsonii: CwatDRAFT_5509
Entry
CwatDRAFT_5509    CDS       T05097                                 
Name
(GenBank) RecJ exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cwa  Crocosphaera watsonii
Pathway
cwa03410  Base excision repair
cwa03430  Mismatch repair
cwa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cwa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CwatDRAFT_5509
   03430 Mismatch repair
    CwatDRAFT_5509
   03440 Homologous recombination
    CwatDRAFT_5509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cwa03400]
    CwatDRAFT_5509
DNA repair and recombination proteins [BR:cwa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CwatDRAFT_5509
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CwatDRAFT_5509
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CwatDRAFT_5509
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: EAM52494
UniProt: Q4C7X7
LinkDB
Position
464137..466482
AA seq 781 aa
MDINRYQWQVLPIISLPSWLVDIVNKYCANSQGTYAAQLLWQRGIKTKEKLQGFLDSDYY
QPLSPWEFGYEMKLAIKRLKFAMDNQQKVTIWGDFDADGITATSVLWEGLGQFFIPHLQL
NYYIPNRSKESHGLNIPGIKKLAEEGTILIVTCDTGSTNLEEINYANSLGIDIIITDHHT
LPDERPNVISIINPRYFSEEHPLFSLSGVAVAYKLVEALYLSFPETPKSPLENLLDLVAI
GLIADLVELKGDCRYLAQQGLKKLQQQLTNTTRPGVAFLLKLCKRSGDRPTDISFGIGPR
INAISRIQGDAHFAVELLTSKDDKLCNKLALETELANTRRKSLQKDIKKDVEKKLQALDL
STTQVIVLEDPQWQSGVLGLVAGQIAQEYGRPTILLTTAETEDMSANDIKLARGSARSVH
NIDLYKLVASQQYLLHRFGGHPFAAGLSLPVENLSLFRESINQQLRQEIIDINTLSSTIT
ADLVVTVSQLGQTLFRELKLLEPYGMGNPIPRLLIQNCWFEGLGNRNIKDAKNNKIQYIK
TKFNIYDRSVEQGFPGIWWEHYQEELPQGQDKLCDAIVELDYNTYGQGRYEVRLIELRES
LKVAENQPLQTTQISLIDYRNQDKVTEIDLEIEQLNTCPISWHKLQKKYQESLKNQHDLA
LTYGYDQEFKSSEIIKKLIGIAKYINRTQKEIRKEQLKEKLLLSDRTLNLALEFLGKIGF
LITDNSETIEIKNITDQSEDYNLSKRKFLDTLKEEHFKRKYFTKIPIETLQKLLIYENLN
P
NT seq 2346 nt   +upstreamnt  +downstreamnt
atggatataaatcgataccagtggcaagttttaccgattatttctttaccttcttggttg
gttgatattgttaacaaatattgtgctaattctcaaggtacttatgctgctcaactatta
tggcagaggggtattaaaaccaaagaaaagttacaaggttttctagatagcgattattat
caacctttgagtccctgggaatttggttatgagatgaaattagccataaaacgcctcaag
tttgctatggataatcaacaaaaagtaaccatttggggtgatttcgatgcggatggaatt
acagcaactagtgttttatgggagggactgggacaattttttataccacatctacaactt
aattattacattcccaatcgctctaaagagtcccacggtttaaatattccgggaattaaa
aaattagcagaagaaggaacaatattgattgtgacttgtgacaccggaagcactaattta
gaggagataaattatgctaattctttaggaattgatattattattacagatcatcatact
ttacccgatgaacgccctaatgtgatctctattattaatcctcgctatttttctgaggag
catcctttattttctttatctggtgttgccgtagcttataaattagttgaagctttgtat
ttaagctttccagaaacccccaaaagtcctttagaaaatttattagatttagttgcaatt
ggtttaattgctgatttagtagaattaaaaggagattgtcgttatttagcacagcagggg
ttaaaaaagctacaacaacagttaactaataccactcgtccaggggttgcctttttactg
aaactatgtaaaagaagcggcgatcgcccgacggatatttcttttggtattggacctaga
attaatgcaatcagtcgcattcaaggagacgctcattttgcggtagaattattaaccagt
aaagatgataaactatgtaataagctggctttagagacagaattagctaatactcgccgt
aagtctttacaaaaggatattaagaaagatgtagaaaaaaaattacaagcgttagactta
tcaactactcaagttattgttttagaagatccccaatggcaaagtggagttttaggatta
gttgcaggacaaattgctcaagaatacggtcgtcccactattttattaactacggctgaa
acagaagatatgagtgcaaatgatattaaattggctagaggttccgcccgttctgttcat
aatattgatttatataaattggttgcttctcaacaatatttattgcatcgttttgggggt
catccttttgcagcagggttgagtttacctgttgaaaatttatctttatttagagaaagt
attaatcaacaactgagacaagaaattattgatattaatacattaagttccactattaca
gcagatttagtagtaaccgtttctcaactaggtcaaactttattcagggaattaaaacta
ttagaaccctacggaatggggaaccctattcctagattattgattcaaaattgttggttt
gaaggtttgggaaataggaacattaaagatgctaaaaataataagattcaatatataaaa
accaagtttaatatttatgatcgttccgttgagcagggttttcctggtatttggtgggaa
cattatcaagaagaattaccccaaggtcaagataagctatgtgatgctattgtggaactg
gattataatacctacggacaaggtaggtatgaggtgcgtttaatcgaacttagagaaagt
ttaaaggttgcagaaaatcagcccctacaaacaactcaaattagtttaatagactacaga
aatcaagataaagttacggaaatagacttagaaatagaacaattgaatacttgtcctatt
agctggcataaattacaaaagaagtaccaagaaagtttaaagaatcaacacgacttagct
ttaacttatggttatgatcaggaatttaagtcctcagaaattatcaaaaaattaatcggt
attgctaaatatattaaccgtactcagaaagagataagaaaagaacaattaaaagaaaaa
ttattgttaagcgatcgcaccctgaatttagccttagaatttttagggaaaatcggcttt
ttaatcactgataattccgaaaccattgaaattaaaaacataaccgatcaatcagaagat
tataatctctcaaaaagaaagtttttagacacccttaaagaagaacattttaaaagaaaa
tattttactaaaattcccatagaaaccttacaaaaattactaatttatgaaaatttgaac
ccataa

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