Crocosphaera watsonii: CwatDRAFT_5509
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Entry
CwatDRAFT_5509 CDS
T05097
Name
(GenBank) RecJ exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cwa
Crocosphaera watsonii
Pathway
cwa03410
Base excision repair
cwa03430
Mismatch repair
cwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CwatDRAFT_5509
03430 Mismatch repair
CwatDRAFT_5509
03440 Homologous recombination
CwatDRAFT_5509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cwa03400
]
CwatDRAFT_5509
DNA repair and recombination proteins [BR:
cwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CwatDRAFT_5509
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CwatDRAFT_5509
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CwatDRAFT_5509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
EAM52494
UniProt:
Q4C7X7
LinkDB
All DBs
Position
464137..466482
AA seq
781 aa
AA seq
DB search
MDINRYQWQVLPIISLPSWLVDIVNKYCANSQGTYAAQLLWQRGIKTKEKLQGFLDSDYY
QPLSPWEFGYEMKLAIKRLKFAMDNQQKVTIWGDFDADGITATSVLWEGLGQFFIPHLQL
NYYIPNRSKESHGLNIPGIKKLAEEGTILIVTCDTGSTNLEEINYANSLGIDIIITDHHT
LPDERPNVISIINPRYFSEEHPLFSLSGVAVAYKLVEALYLSFPETPKSPLENLLDLVAI
GLIADLVELKGDCRYLAQQGLKKLQQQLTNTTRPGVAFLLKLCKRSGDRPTDISFGIGPR
INAISRIQGDAHFAVELLTSKDDKLCNKLALETELANTRRKSLQKDIKKDVEKKLQALDL
STTQVIVLEDPQWQSGVLGLVAGQIAQEYGRPTILLTTAETEDMSANDIKLARGSARSVH
NIDLYKLVASQQYLLHRFGGHPFAAGLSLPVENLSLFRESINQQLRQEIIDINTLSSTIT
ADLVVTVSQLGQTLFRELKLLEPYGMGNPIPRLLIQNCWFEGLGNRNIKDAKNNKIQYIK
TKFNIYDRSVEQGFPGIWWEHYQEELPQGQDKLCDAIVELDYNTYGQGRYEVRLIELRES
LKVAENQPLQTTQISLIDYRNQDKVTEIDLEIEQLNTCPISWHKLQKKYQESLKNQHDLA
LTYGYDQEFKSSEIIKKLIGIAKYINRTQKEIRKEQLKEKLLLSDRTLNLALEFLGKIGF
LITDNSETIEIKNITDQSEDYNLSKRKFLDTLKEEHFKRKYFTKIPIETLQKLLIYENLN
P
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggatataaatcgataccagtggcaagttttaccgattatttctttaccttcttggttg
gttgatattgttaacaaatattgtgctaattctcaaggtacttatgctgctcaactatta
tggcagaggggtattaaaaccaaagaaaagttacaaggttttctagatagcgattattat
caacctttgagtccctgggaatttggttatgagatgaaattagccataaaacgcctcaag
tttgctatggataatcaacaaaaagtaaccatttggggtgatttcgatgcggatggaatt
acagcaactagtgttttatgggagggactgggacaattttttataccacatctacaactt
aattattacattcccaatcgctctaaagagtcccacggtttaaatattccgggaattaaa
aaattagcagaagaaggaacaatattgattgtgacttgtgacaccggaagcactaattta
gaggagataaattatgctaattctttaggaattgatattattattacagatcatcatact
ttacccgatgaacgccctaatgtgatctctattattaatcctcgctatttttctgaggag
catcctttattttctttatctggtgttgccgtagcttataaattagttgaagctttgtat
ttaagctttccagaaacccccaaaagtcctttagaaaatttattagatttagttgcaatt
ggtttaattgctgatttagtagaattaaaaggagattgtcgttatttagcacagcagggg
ttaaaaaagctacaacaacagttaactaataccactcgtccaggggttgcctttttactg
aaactatgtaaaagaagcggcgatcgcccgacggatatttcttttggtattggacctaga
attaatgcaatcagtcgcattcaaggagacgctcattttgcggtagaattattaaccagt
aaagatgataaactatgtaataagctggctttagagacagaattagctaatactcgccgt
aagtctttacaaaaggatattaagaaagatgtagaaaaaaaattacaagcgttagactta
tcaactactcaagttattgttttagaagatccccaatggcaaagtggagttttaggatta
gttgcaggacaaattgctcaagaatacggtcgtcccactattttattaactacggctgaa
acagaagatatgagtgcaaatgatattaaattggctagaggttccgcccgttctgttcat
aatattgatttatataaattggttgcttctcaacaatatttattgcatcgttttgggggt
catccttttgcagcagggttgagtttacctgttgaaaatttatctttatttagagaaagt
attaatcaacaactgagacaagaaattattgatattaatacattaagttccactattaca
gcagatttagtagtaaccgtttctcaactaggtcaaactttattcagggaattaaaacta
ttagaaccctacggaatggggaaccctattcctagattattgattcaaaattgttggttt
gaaggtttgggaaataggaacattaaagatgctaaaaataataagattcaatatataaaa
accaagtttaatatttatgatcgttccgttgagcagggttttcctggtatttggtgggaa
cattatcaagaagaattaccccaaggtcaagataagctatgtgatgctattgtggaactg
gattataatacctacggacaaggtaggtatgaggtgcgtttaatcgaacttagagaaagt
ttaaaggttgcagaaaatcagcccctacaaacaactcaaattagtttaatagactacaga
aatcaagataaagttacggaaatagacttagaaatagaacaattgaatacttgtcctatt
agctggcataaattacaaaagaagtaccaagaaagtttaaagaatcaacacgacttagct
ttaacttatggttatgatcaggaatttaagtcctcagaaattatcaaaaaattaatcggt
attgctaaatatattaaccgtactcagaaagagataagaaaagaacaattaaaagaaaaa
ttattgttaagcgatcgcaccctgaatttagccttagaatttttagggaaaatcggcttt
ttaatcactgataattccgaaaccattgaaattaaaaacataaccgatcaatcagaagat
tataatctctcaaaaagaaagtttttagacacccttaaagaagaacattttaaaagaaaa
tattttactaaaattcccatagaaaccttacaaaaattactaatttatgaaaatttgaac
ccataa
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