Crocosphaera watsonii: CwatDRAFT_5532
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Entry
CwatDRAFT_5532 CDS
T05097
Name
(GenBank) SMC protein, N-terminal
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cwa
Crocosphaera watsonii
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cwa03400
]
CwatDRAFT_5532
DNA repair and recombination proteins [BR:
cwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CwatDRAFT_5532
Archaeal homologous recombinant proteins
CwatDRAFT_5532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_15
AAA_29
AAA_21
ABC_tran
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
EAM52528
UniProt:
Q4C7U3
LinkDB
All DBs
Position
495797..498823
AA seq
1008 aa
AA seq
DB search
MIPLQLTLKNFLSYRDIILDFRGLHTACICGANGAGKSSLLEAITWVIWGKSRTATDEDI
IHTTADYVRVDFEFICYEQSYKIIRSRQRGKSNTLDFQINSGDEFISLSGKGVRATQDII
IATLKLDYDTFINSAYLRQGRADEFMLRGATDRKKVLAELLKLEQYQHLAEKAKDLSKQY
KGQSEQLKLNLDRVKQQIEERKNINNQQKFINQEIDKIQKSQQTDQEKLQTIKQKNSHRQ
AWLEQFTWHQNKQDNLEKEAHKLDKESAELVHKINKSETLINQEQEITEKYEELLILQKQ
EETLSYQFQVSQELQQEKQKIEQEIFRKNNQLQLQIRQEKNRLEQLEDNEKDLQKIIAQS
EEIKEAVGKLNDHRKRLKELDKLQHKVTPLLKQKQTLETELEKIKANLEAKLEQFESLDT
QYHQELKKIPERRQHLLELDDKIQEIDNQKVYQQRVKEKAQERKLTQEKLIVNKRNNTEK
IEELQQKINLLNNPDSACPLCEQELDENRRNNVVDKTYQQQQKLQEQIWFLQEELSVIKR
DIKSLNIEDKQLENKLKNLGSIQQEFSRIEAQLDQAGEVKIKSKKLQKEKESIENLIATE
TYGMDIQNDIKIINKRLEELNYDEQSHGLARGEVDRLRWAEIKQARIEDAIRNQKKIAQQ
KSEIITKIEQLEKEITKLETDSELKHKSNNIENKLKSLNYDRAYHQRISSYIRKSQSCVV
DYQKLQDIKQQYPQLKEQLEAVKLKINNNQEERKDTDKFIQQLSTQLETIEDHTEEIERL
ETKLKEQRQILDNLLAEKGRIEQSLSQLESLKKDQEEQKEQYNQVRKQYRVYTELTKAFS
KNGIQLLMIENVLPQLEAETNQILSRLTGNQFHIRFVTQRAGKSGSSRKKSAKMIDTLDI
IISDTKGSRAYETYSGGEAFRINFSVRLALAKLLAQRAGTTLQMLIIDEGFGTQDTEGCE
RLIAAINAISSDFSCILAVTHMPRFQEAFQHRIEVYKTNQGSKINLVS
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattcctttgcaacttaccctaaaaaactttttgagttatagagatataatccttgat
tttcgggggttacatactgcttgtatttgtggggcaaatggtgcaggaaaatcatcatta
ttagaagcgataacttgggttatttggggaaaaagtcgaaccgctacggatgaagatata
attcacactacggcagactatgttagggttgatttcgagtttatttgttatgaacaaagt
tataagattattcgtagtcgtcaaagaggtaaaagtaatactttagactttcaaattaat
agtggtgatgagtttatttctttgagtggtaaaggggttagggcgactcaggatattatt
attgctaccttgaaattagattatgatacttttattaattcagcctatttacgtcaagga
agggctgatgaatttatgttacggggggcaacagatagaaaaaaagttttggcagaatta
ttaaaattagaacagtatcaacatttagcagaaaaagccaaagatttatcgaaacaatat
aaagggcaatctgaacaactcaaattaaacttagatagagttaaacaacagatagaagaa
agaaagaatattaataatcagcaaaaatttattaatcaagaaattgacaaaatacaaaaa
tcacaacaaacagatcaagaaaaattacaaacaattaaacaaaaaaatagtcatcgtcaa
gcttggttagaacaatttacatggcatcaaaataaacaagataatttagagaaagaagca
cataaattagataaagaatcggctgaattagttcataagattaataagtcagaaactctg
attaatcaagaacaggaaattactgaaaaatacgaagagttattaatattacaaaaacaa
gaagaaaccttatcctatcaattccaagtttcacaggaacttcaacaggaaaaacaaaaa
atagaacaagaaattttcagaaaaaataatcagttacaattacaaattcgccaagaaaaa
aaccgtttagaacagttagaagacaatgaaaaagacttacaaaaaataattgctcaatct
gaggaaattaaggaagcagtaggaaagttaaatgatcatcgtaaacgtttgaaagaatta
gataaactacaacataaagttacccccttgttgaaacaaaaacaaactttagaaacagaa
ttagaaaaaataaaagctaatttagaagcaaaattggaacaatttgaaagtttagacact
cagtatcatcaagaattgaagaaaattcctgaaagacggcaacatcttttagagttagat
gataagatacaagaaattgacaatcaaaaagtttatcagcaaagggttaaagaaaaagct
caagaaagaaaattgacacaagaaaaattaatagttaataaacgcaacaatacagaaaaa
atagaagaattacagcaaaaaataaacctattaaataatccagactctgcttgtccttta
tgtgagcaagaattagatgaaaatcgccgtaataatgttgttgataagacttatcagcaa
cagcagaaactgcaagaacagatttggtttttacaagaggaactatctgttattaagcgg
gatattaaatcattaaatattgaagataaacaattagaaaataagctgaaaaatttggga
agtattcaacaagaattttcccgaatagaagcacaacttgatcaagcaggagaggtaaaa
attaagtcaaaaaaactacaaaaagaaaaagaatctattgaaaacttaatcgcaacagaa
acctatggtatggatatacaaaatgatattaaaatcattaataaaagactagaagaactg
aattatgatgaacaaagtcatgggttagctaggggggaagttgatcggttaagatgggca
gaaattaaacaagctagaatagaagatgctattcgtaatcaaaagaaaatagctcaacaa
aaatcagaaattatcactaaaattgaacagttagaaaaggagataacaaaactagaaaca
gattcagaattaaaacataaaagtaataatatagaaaataaattaaagagtttaaactat
gatagagcttatcatcaaagaatttctagttatattcgcaaatctcaatcttgtgtagtt
gattaccaaaaattgcaagatatcaaacaacaatatcctcaattaaaagaacagttagaa
gctgttaaattgaagattaataataatcaagaagaacgaaaagatacagacaagtttata
caacaattatcaactcaattagaaacaattgaagatcatacagaagagattgaaagatta
gaaacaaaactaaaagaacaaagacaaatattagataatttactcgctgaaaaaggaaga
atagaacaatctttatctcaactggaaagcttaaaaaaagaccaagaagaacaaaaagaa
caatataatcaggttcgtaaacaatatagagtttatacagaattaaccaaagctttcagt
aaaaacggcattcaattattaatgatagaaaatgttttaccacaattagaagcagaaaca
aatcaaatcctatcacgattaacaggtaatcaatttcatattagatttgtgacacaacgt
gcaggaaaaagtggcagttctaggaaaaaatctgccaagatgatcgatacattagatatt
attatttctgatacaaaaggcagtcgtgcttatgaaacttactcaggaggtgaagctttt
aggattaacttttctgtgcgtttagcattagctaaattattggcacaacgtgccggaact
acattacaaatgttaattattgacgaaggttttggaacccaagatacagagggatgtgaa
cgtttaattgcagccattaatgctatttcttctgacttttcttgtattttagctgtcacc
catatgccccgatttcaagaagcttttcaacatcgtattgaagtatataaaactaatcaa
ggatcaaaaataaatttagttagttag
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