Crocosphaera watsonii: CwatDRAFT_6257
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Entry
CwatDRAFT_6257 CDS
T05097
Name
(GenBank) Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
cwa
Crocosphaera watsonii
Pathway
cwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CwatDRAFT_6257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwa03019
]
CwatDRAFT_6257
03009 Ribosome biogenesis [BR:
cwa03009
]
CwatDRAFT_6257
Enzymes [BR:
cwa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
CwatDRAFT_6257
Messenger RNA biogenesis [BR:
cwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CwatDRAFT_6257
Ribosome biogenesis [BR:
cwa03009
]
Prokaryotic type
rRNA helicases
CwatDRAFT_6257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
AAA_19
HEM4
Motif
Other DBs
NCBI-ProteinID:
EAM53163
UniProt:
Q4C9X3
LinkDB
All DBs
Position
465514..466956
AA seq
480 aa
AA seq
DB search
MTISFENLGLSDARVNKLQRLGFESPTEIQEKAIPLILESNDILGQSQTGTGKTAAYSLP
ILEQIDTKNPNVQTLILTPTRELAQQVAEALKDFSTERRLYILTVYGGQSIERQIRSLER
GVQIVVGTPGRVIDLLERKKLVLDCLRWAVLDEADEMLSMGFIDDVKTILRKTPETRNTA
CFSATMPREIRDLVNQFLKSPVTVSVERKQAAPTHIDQHLYYVPRGWSKRKALQPILEME
DPESAIIFVRTKQTASELTTRLQEIGHSVDEYHGNLSQSQRERLVYRFRDGKIKLVVATD
IAARGLDVENLSHVINYDLPDNSETYIHRIGRTGRAGKTGTAISLIEPVDRRMVRQIERK
LRQKLETCKIPSRSQVEAKRIEKLQNEIKESLAGERMASFLPLVRELSDEYDPQAIAAAA
LQMIYDQDCPEWMKTDWEVPESAVPKPVIKRKGKYNPNNSKRHGNSNRGNRKKVIHPQTR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttccttcgagaacttaggactatccgacgcccgtgtaaacaagttacaaaga
ctgggctttgaaagtcctaccgagattcaagaaaaagcaatacccttaattttagaaagc
aacgatatcttaggacaatcccaaacaggaacgggaaaaactgcggcctattccttacct
attctggaacaaattgataccaaaaatcctaatgttcagacattaatactaaccccaact
cgtgaacttgctcaacaagttgccgaggcgttaaaagatttttcgacagaacgtcgtcta
tatattttaacggtttatgggggtcaatccattgaaagacaaatccgtagtttagaacga
ggggtacagattgttgtcggaacaccaggacgagttatagacttattagaacggaaaaaa
ttggttctagactgtctgcgttgggcggttctcgatgaagcagacgaaatgttaagtatg
ggcttcattgatgatgtaaaaacgatcctgagaaaaacccctgaaactcgtaatacagct
tgtttctctgccaccatgccccgagaaatacgagacttagttaatcagttcctcaagtct
cccgtcaccgtatctgtagaacgcaagcaagccgcccctacacacattgaccagcatctc
tattatgttcccaggggatggtcaaaacgcaaagccctacaaccgatcttagagatggaa
gatccagagtcggccatcatctttgtccgtactaagcaaactgcctcagaattaaccacc
aggctacaagaaatcggtcatagtgtggacgaatatcatggtaacctctcccagtcccaa
agagaaagattagtctatcgctttcgggacggaaaaattaagttagtggtagccacagat
attgcggctcggggtttagatgtagaaaatttaagtcacgttatcaattacgacttaccc
gataatagtgaaacctatatccaccgtattggtcgtacaggacgtgcaggaaagacaggg
acagctatttccctcatcgaaccggttgatcgccgtatggtaagacaaattgagcggaaa
ctgcgacaaaaattagaaacctgcaagatccccagtcgttctcaagtagaagcaaaacgc
atcgagaaactgcaaaatgagattaaagaatctttagcaggagaacgcatggcctcattt
ttacccttggtaagggaattgagtgatgaatacgatccccaagcgatcgcagcggctgct
ttacagatgatctacgatcaagactgtcccgagtggatgaaaaccgattgggaagtacca
gagtccgccgtacctaaacccgtcattaaacgcaaaggaaaatataatcccaataattct
aagcgtcatggcaattctaaccgaggtaatcgcaagaaagttattcatccacaaactcgt
tag
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