KEGG   Crocosphaera watsonii: CwatDRAFT_6257
Entry
CwatDRAFT_6257    CDS       T05097                                 
Name
(GenBank) Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
cwa  Crocosphaera watsonii
Pathway
cwa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cwa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CwatDRAFT_6257
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cwa03019]
    CwatDRAFT_6257
   03009 Ribosome biogenesis [BR:cwa03009]
    CwatDRAFT_6257
Enzymes [BR:cwa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     CwatDRAFT_6257
Messenger RNA biogenesis [BR:cwa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CwatDRAFT_6257
Ribosome biogenesis [BR:cwa03009]
 Prokaryotic type
  rRNA helicases
   CwatDRAFT_6257
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Flavi_DEAD AAA_19 HEM4
Other DBs
NCBI-ProteinID: EAM53163
UniProt: Q4C9X3
LinkDB
Position
465514..466956
AA seq 480 aa
MTISFENLGLSDARVNKLQRLGFESPTEIQEKAIPLILESNDILGQSQTGTGKTAAYSLP
ILEQIDTKNPNVQTLILTPTRELAQQVAEALKDFSTERRLYILTVYGGQSIERQIRSLER
GVQIVVGTPGRVIDLLERKKLVLDCLRWAVLDEADEMLSMGFIDDVKTILRKTPETRNTA
CFSATMPREIRDLVNQFLKSPVTVSVERKQAAPTHIDQHLYYVPRGWSKRKALQPILEME
DPESAIIFVRTKQTASELTTRLQEIGHSVDEYHGNLSQSQRERLVYRFRDGKIKLVVATD
IAARGLDVENLSHVINYDLPDNSETYIHRIGRTGRAGKTGTAISLIEPVDRRMVRQIERK
LRQKLETCKIPSRSQVEAKRIEKLQNEIKESLAGERMASFLPLVRELSDEYDPQAIAAAA
LQMIYDQDCPEWMKTDWEVPESAVPKPVIKRKGKYNPNNSKRHGNSNRGNRKKVIHPQTR
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgaccatttccttcgagaacttaggactatccgacgcccgtgtaaacaagttacaaaga
ctgggctttgaaagtcctaccgagattcaagaaaaagcaatacccttaattttagaaagc
aacgatatcttaggacaatcccaaacaggaacgggaaaaactgcggcctattccttacct
attctggaacaaattgataccaaaaatcctaatgttcagacattaatactaaccccaact
cgtgaacttgctcaacaagttgccgaggcgttaaaagatttttcgacagaacgtcgtcta
tatattttaacggtttatgggggtcaatccattgaaagacaaatccgtagtttagaacga
ggggtacagattgttgtcggaacaccaggacgagttatagacttattagaacggaaaaaa
ttggttctagactgtctgcgttgggcggttctcgatgaagcagacgaaatgttaagtatg
ggcttcattgatgatgtaaaaacgatcctgagaaaaacccctgaaactcgtaatacagct
tgtttctctgccaccatgccccgagaaatacgagacttagttaatcagttcctcaagtct
cccgtcaccgtatctgtagaacgcaagcaagccgcccctacacacattgaccagcatctc
tattatgttcccaggggatggtcaaaacgcaaagccctacaaccgatcttagagatggaa
gatccagagtcggccatcatctttgtccgtactaagcaaactgcctcagaattaaccacc
aggctacaagaaatcggtcatagtgtggacgaatatcatggtaacctctcccagtcccaa
agagaaagattagtctatcgctttcgggacggaaaaattaagttagtggtagccacagat
attgcggctcggggtttagatgtagaaaatttaagtcacgttatcaattacgacttaccc
gataatagtgaaacctatatccaccgtattggtcgtacaggacgtgcaggaaagacaggg
acagctatttccctcatcgaaccggttgatcgccgtatggtaagacaaattgagcggaaa
ctgcgacaaaaattagaaacctgcaagatccccagtcgttctcaagtagaagcaaaacgc
atcgagaaactgcaaaatgagattaaagaatctttagcaggagaacgcatggcctcattt
ttacccttggtaagggaattgagtgatgaatacgatccccaagcgatcgcagcggctgct
ttacagatgatctacgatcaagactgtcccgagtggatgaaaaccgattgggaagtacca
gagtccgccgtacctaaacccgtcattaaacgcaaaggaaaatataatcccaataattct
aagcgtcatggcaattctaaccgaggtaatcgcaagaaagttattcatccacaaactcgt
tag

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