Crocosphaera watsonii: CwatDRAFT_6585
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Entry
CwatDRAFT_6585 CDS
T05097
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cwa
Crocosphaera watsonii
Brite
KEGG Orthology (KO) [BR:
cwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cwa03016
]
CwatDRAFT_6585
Enzymes [BR:
cwa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CwatDRAFT_6585
Transfer RNA biogenesis [BR:
cwa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CwatDRAFT_6585
Prokaryotic type
CwatDRAFT_6585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
EAM53048
UniProt:
Q4CA88
LinkDB
All DBs
Position
complement(333240..334133)
AA seq
297 aa
AA seq
DB search
MLGFIPLNKPSGFTSHDCVAKVRRLLNIKKVGHGGTLDPAATGVLPIAVGKATRLLPFLP
ENKAYRATIRFGMQTTTDDLQGEVIQRQSASHLTIEEIKPLFNDFLGEIEQIPPIYSAIQ
RDGKRLYELARKGEIVDIPVRRVKVDKIEVLDWYVEEFCELVVNIECGPGTYIRAIARDI
GDKLGVGGTLAALTRTKSCGMILSESISLEELEKQIEEGTFSLNEPGLLLKHLPNITLSL
EEGKRWGQGQKIAISSINFVTADDIIQVNNEAGEFLGISQIISKDTHQILKPKVVIK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcttggatttatccctttaaataaaccatcagggtttacgtctcatgattgtgttgcc
aaggttagacgactcttaaacatcaaaaaggtaggacacggaggaaccctagatccagca
gcaacaggggttttacccatagcagttggtaaagcaactcgtctcttaccttttttacca
gaaaataaggcttatcgggcgactattcgcttcgggatgcaaaccacaaccgatgatctc
caaggagaggttattcaacgtcaatctgcctctcatttgactatagaagagattaaaccc
ttattcaacgattttttaggtgaaattgagcaaataccccctatatatagtgctattcaa
agagatggtaaacgattgtatgagttagcaaggaaaggagaaatcgtggatattcctgtg
agaagagttaaggttgacaaaatagaagttttagactggtatgtagaagaattttgtgaa
ttggtggttaatattgaatgtggtccagggacttatattcgggcgatcgccagggatata
ggggacaagctaggggttgggggaaccttagcagcattaaccagaactaaaagttgtggc
atgattctatcagaaagcattagtttagaagagttagaaaaacaaattgaagaaggaaca
ttttctttaaatgaaccaggattacttctaaaacatttacccaatattactctttcttta
gaagaaggtaaacgttggggtcaaggacaaaaaatagcaatttcttctattaattttgtt
actgctgatgacattattcaggtaaataatgaagcaggggagtttttaggaatcagtcaa
attatctctaaagatactcatcaaattctcaagccaaaagttgttattaaatag
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