Cellulomonas wangleii: KG103_06410
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Entry
KG103_06410 CDS
T08575
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cwan
Cellulomonas wangleii
Pathway
cwan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KG103_06410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwan03019
]
KG103_06410
03400 DNA repair and recombination proteins [BR:
cwan03400
]
KG103_06410
Enzymes [BR:
cwan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KG103_06410
Messenger RNA biogenesis [BR:
cwan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KG103_06410
DNA repair and recombination proteins [BR:
cwan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KG103_06410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HTH_Crp_2
HTH_IclR
DUF3553
HEM4
MarR_2
AAA_30
DprA_WH
HTH_11
Cas3-like_C_2
ApbA
MarR
TrmB
HTH_36
HTH_Cmi2_C
HTH_29
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QVI63493
LinkDB
All DBs
Position
1385509..1387122
Genome browser
AA seq
537 aa
AA seq
DB search
MGVTEDRELDEAVGRVLGEGTALRQAQRDALAGLDTHDTVLVARTGAGKTAVYAIATLVA
ARLTVVVSPLIALQRDQERALRESGLRVSSVSSVRTAAQQRDALAAAASGDLDVLLLGPE
QLQREVVLEALTGADVGLVVVDEAHCVAEWGHDFRPDYLLVGAATRRLGAPRILALTATA
STHVRDEIVRLLGMREPRVLVHDADRPNIWLGARPTATEDERDAGVVAEVAAEPGPVIVY
ARTRAHCERLAERLADVRPALVYHAGLPAAERAATQDAFLAGRHDVVVATSAFGMGIDRA
DVRLVVHAGPPATLDQYYQEVGRAGRDGEPARGLVLHRAEDHALARYQRGGGGPRPGTLA
KVLTALAEGPVGQQVLAERAGLARRTVVRALATLEQVGAVRHDDGRVSLVADADPRTVLE
QVHEQGERRARLEASRVELVRSYTDTTDCRRRLLLELLGEERTEPCGRCDSCDAGTSLAV
AEGAVRPGQEVRHREFGAGTVSVVEPERVTVLFEERGYVTLDTQIALDAELLALVDG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgtgaccgaggaccgggagctggacgaggccgtgggccgggtgctgggcgaggga
accgcgctgcggcaggcgcagcgcgacgccctcgcggggctcgacacccatgacacggtg
ctggtggcccgcacgggtgcgggcaagaccgcggtgtacgcgatcgcgaccctcgtcgcg
gcgcggctcaccgtggtggtgtcgccgttgatcgcgctgcagcgcgaccaggagcgggcc
ctgcgggagtccgggctgcgggtgtcgtccgtgagctcggtgcggaccgccgcccagcag
cgcgacgccctggccgcggccgcgtccggcgacctcgacgtgctgctcctggggcccgag
cagctccagcgcgaggtggtcctcgaggcgctgacgggcgccgacgtgggtctcgtcgtc
gtggacgaggcgcactgcgtcgccgagtggggccacgacttccggcccgactacctgctg
gtcggtgccgcgacgcgacggctcggtgcaccgcgcatcctggcgctgacggcgacggcg
tccacgcacgtgcgcgacgagatcgtgcggctcctgggcatgcgggaaccgcgcgtgctg
gtgcacgacgccgaccggcccaacatctggctgggcgcgcggccgaccgcgacggaggac
gagcgggacgccggcgtggtcgccgaggtcgccgcggagccgggtccggtgatcgtctac
gcccggacccgggcgcactgcgagcggctggccgagcggctcgcggacgtgcggcccgcg
ctggtctaccacgcgggtctgccggcggcggagcgggccgccacgcaggacgccttcctg
gccggccggcacgacgtcgtcgtcgcgacgtccgcgttcggcatggggatcgaccgcgcc
gacgtgcgcctcgtcgtgcacgcggggccgcccgccacgctcgaccagtactaccaggag
gtcgggcgggccggccgggacggtgagcctgcccggggcctggtgctgcaccgtgccgag
gaccacgcactggcccggtaccagcgcggtggcggcggcccgcgtcccggcacgctggcg
aaggtgctgaccgcgctggcggagggccccgtgggccagcaggtgctcgcggagcgcgcg
gggctcgcacgtcgcaccgtcgtccgtgccctcgcgacgctcgagcaggtcggggcggtc
cggcacgacgacgggcgcgtgtcgctggtcgccgacgccgacccgcgcaccgtcctggag
caggtgcacgagcagggtgagcggcgcgcccggctggaggcgtcgcgggtcgagctcgtc
cggtcctacaccgacacgaccgactgccggcgccgcctgctgctggagctgctgggggag
gagcgcaccgagccgtgcggccgctgcgacagctgtgacgcgggcacgtccctggccgtc
gccgagggggccgtccgccccgggcaggaggtgcggcaccgggagttcggggccggcacg
gtgagcgtcgtggagcccgagcgggtcacggtcctgttcgaggagcggggctacgtcacc
ctggacacgcagatcgccctggacgccgagctgctcgcgctggtcgacggctga
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