KEGG   Citrobacter werkmanii: CO701_00250
Entry
CO701_00250       CDS       T05129                                 
Name
(GenBank) RNase E specificity factor CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
cwe  Citrobacter werkmanii
Brite
KEGG Orthology (KO) [BR:cwe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cwe03019]
    CO701_00250
Messenger RNA biogenesis [BR:cwe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CO701_00250
SSDB
Motif
Pfam: GAPES4 EAL GGDEF GDPD GGDEF_2 GGDEF_GdpP
Other DBs
NCBI-ProteinID: ATF47695
LinkDB
Position
40553..42493
AA seq 646 aa
MRLTTKFSAFVTLLTGLTIFVTLIGCSLSFYNAIQYKFTSRVQAVATAIDTHLVSKDFVT
LTPQIDELMVSVDIVRVELLQGESKVYSHSRTSSYRPAGTNNLYREITVPLLKHPGMSLR
LVYQDPMGNYFHSLMTTAPLTLSIGFIILMLFLSVRWLQRQLSGQELLEIRSTRILNGER
GPNVRGTVYEWPARTSSALDMLLTEIQSAREQRSRLDTLIRSYVAQDTKTGLSNRLFFDN
QLATLLEDQEKVGAHGVVMMVRLPDFTLLRDSWGGDLAEEQISALVNLLSTFIARYPGAL
LARYHRSDFAILLPHRTLKEAESIAGQLLKAVDALPTNKKIDRADMIHIGICVCRSGQSA
EQVMEHAEAATRNSVLQGGNSWSVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
THEGRVHHRELMCRIFDGSEEVISAEYMPMVLQFGLAEEYDRLQISRLILLLGYWPQESL
AIQTTVESLIRPRFQRWLRDTLMQCEKSLRKRIIIELAEADVCQHISRLQPVIRLMDALG
VRIAVTQAGLTLVSTSWIKELNVELLKLHPGLVRNIDKRTENQLLVQSLVEACSGTPTQV
YATGVRSRSEWRTLTERGVAGGQGDFFAASQPLDTNVKKYSQRYSV
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgcgattaacgacgaaattttcagcttttgtgactttgctcacagggttaacgatcttc
gtgacgctgatcggctgctcgctgagtttctacaatgcgatccaatataagttcactagt
cgtgtccaggccgtcgcgacggcgatcgacacgcacctggtttctaaagattttgtcacc
ttaacgccgcaaatagacgagctgatggtgtcggttgatatcgttcgcgttgagctgctg
cagggggaaagcaaggtttatagccattcccgcaccagcagttatcgcccggcgggaaca
aataatctgtaccgtgagatcaccgtccctttgctcaagcatccggggatgtcgctgcgc
ctggtgtatcaggatccgatgggcaattatttccattcgctgatgaccaccgcaccgctc
acactgtcgattggttttattatcctgatgttatttttgtcggtgcgctggctacagcgc
cagctttccgggcaggaactgttggagattcgttccacgcggatccttaacggtgaacgt
gggccgaatgtgcggggaaccgtgtatgaatggccggcgcgcaccagcagtgcgctcgat
atgctgctcaccgaaattcaaagcgctcgcgagcagcgcagcaggctggatacgcttatc
cgatcgtatgtggcgcaggatacaaaaaccgggctcagcaatcgtctgttttttgacaat
caactggcgacgctgctggaagatcaggagaaagtgggcgcccacggcgtggtaatgatg
gtgcgtttgccggactttacgcttttgcgcgacagttgggggggggatcttgcggaagaa
caaatctcggcgctggtcaatttattatcgacctttattgcgcgttatcctggggcgctg
ttggcgcgctaccaccgtagcgattttgccatcctgctgccgcaccgcaccttgaaagag
gcggaaagcatcgctgggcagttgttaaaagcggtcgatgcccttccgactaacaaaaaa
attgatcgtgccgatatgattcatattggcatttgcgtctgtcgcagcggccagtccgct
gaacaggtgatggagcacgctgaagcggcaacccggaactcggtattacagggcgggaac
agttggtcagtttatgatgactcgctgccggaaaaaggtcggggtaatgtgcgctggcgc
acgctcattgagcagatgctcagtcggggcggtccaaggctctatcagaaacccgcggtc
acccatgaaggacgagtacaccatcgggaattaatgtgccgcatttttgatggcagtgaa
gaggttatctcggcggaatatatgccgatggtgctgcaatttggcctggcggaagaatat
gatcgtttgcagattagccgtctgatcttgttattgggatattggccgcaggaaagtctg
gcgatccagacgacggttgagtcacttattcgaccgcgttttcagcgttggctgcgtgat
accttgatgcagtgcgaaaaatcgctgcgaaaacgcataattattgaacttgctgaggca
gatgtttgtcaacacatcagccggttacagcccgttatccgtttgatggatgcgctgggt
gtccgcattgccgtgacgcaggcggggttgacgctggtgagtaccagctggattaaagaa
ctcaatgtcgagctcttgaagcttcatccaggtctggtgagaaacattgataaacgtacg
gagaaccagctgttggttcagagcctggtggaggcctgctcaggaacgccaacgcaggtg
tatgccactggcgttcgttcgcgtagtgagtggcgtacgctgacagaacgtggagtcgcg
ggtgggcaaggggatttttttgccgcatcacagccacttgacacaaacgtgaaaaaatat
tcgcaaagatactcggtttaa

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