Citrobacter werkmanii: CO701_00705
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Entry
CO701_00705 CDS
T05129
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cwe
Citrobacter werkmanii
Pathway
cwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CO701_00705 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwe03019
]
CO701_00705 (pnp)
03016 Transfer RNA biogenesis [BR:
cwe03016
]
CO701_00705 (pnp)
Enzymes [BR:
cwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CO701_00705 (pnp)
Messenger RNA biogenesis [BR:
cwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CO701_00705 (pnp)
Transfer RNA biogenesis [BR:
cwe03016
]
Prokaryotic type
tRNA degradation factors
CO701_00705 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
OB_RRP5_4th
aRib
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ATF47775
LinkDB
All DBs
Position
133133..135265
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AA seq
710 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKTKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFINEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGLPFNGPIGSARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIKEINELVKVAGKPRWDWQPEAVNE
ALNARVAALAETRLSDAYRITDKQERYAQVDVIKSETIAQLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTTR
DAQNLDELMGERTDNFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPELDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASLGE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccaacataccgtaacgctggaaact
ggcatgatggcacgtcaggctactgctgctgttatggttagcatggatgacaccgcggta
tttgtgaccgttgttggtcagaaaaagaccaagccaggccaggatttcttcccgctgacc
gttaactatcaggagcgtacctacgctgctggccgtatcccgggtagcttcttccgtcgt
gaaggccgtccgagtgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggtttcatcaacgaagttcaggttattgcgaccgttgtctccgtt
aacccgcaggttaacccagatatcgtggcaatgatcggcgcatccgctgcgctgtccttg
tctggtctgccgttcaacggcccgatcggttctgctcgtgttggttatatcaatgaccag
tatgtactgaacccgactcaagacgaactgaaagaaagcaagctggacctggttgttgcc
ggtactgaagctgccgtactgatggttgaatccgaagctgaactgctgagcgaagaccag
atgctgggcgctgtcgtattcggtcacgaacagcagcagattgttatcaaagaaatcaac
gagctggttaaagtcgctggcaaaccgcgttgggactggcagccagaagctgtcaacgaa
gcgctgaatgcacgcgttgccgcgctggcagaaacgcgtttgagcgatgcttaccgtatc
accgacaaacaagagcgttatgctcaggttgacgtgatcaaatctgaaaccatcgctcag
ctggttgcagaagacgaaaccctggacgctaacgaactgggtgaaatcctgcacgctatc
gagaaaaacgtcgttcgtagccgcgtactggcaggcgagccgcgcatcgatggccgcgaa
aaagacatgatccgtggtctggacgtgcgtactggcgtactgccgcgtactcacggttcc
gcactgttcacccgtggcgaaactcaggcgctggttactgcgaccctgggcaccacccgt
gatgcgcagaacctcgacgaactgatgggcgagcgtactgacaacttcctgttccactac
aacttccctccgtactgcgtaggcgaaaccggtatggtcggttctccgaagcgtcgtgag
attggtcacggccgtctggcgaaacgcggcgtgctggcagtgatgccggaactggacaaa
ttcccgtacaccgtacgtgttgtgtctgaaatcaccgaatccaacggttcttcttccatg
gcttccgtgtgcggtgcttctctggcactgatggacgcaggcgtgccgatcaaagccgct
gttgcgggtatcgcgatgggtctggtgaaagaaggcgataactttgtggttctgtctgac
attctgggtgacgaagatcacctgggcgacatggactttaaagtggcgggttcccgcgat
ggtatctctgcactgcagatggatatcaaaatcgaaggtatcaccaaagagatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcacatcttgggcgtgatggaacaggcg
atcaatgcgccgcgcggcgacatctctcagttcgctccgcgtatccacaccattaagatc
agcccggacaaaatcaaagacgttatcggtaaaggcggttctgttatccgtgctctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgatggtactgtgaagatcgcggcgacc
gacggtgaaaaagcgaaatatgctatccgtcgtatcgaagagattactgcagaaatcgaa
gttggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
atcggtggcggtaaagaaggtttggtacacatctctcagatagccgacaagcgcgtagag
aaagtgaccgattacctgcagatgggtcaggaagtaccggttaaagttctggaagttgat
cgccagggccgcgtacgtctgagcattaaagaagcaactgagcagtctcagccagcagct
gcgccggaagcaccggcaagcctcggcgagtaa
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