Citrobacter werkmanii: CO701_03600
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Entry
CO701_03600 CDS
T05129
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cwe
Citrobacter werkmanii
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cwe03016
]
CO701_03600
Enzymes [BR:
cwe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CO701_03600
Transfer RNA biogenesis [BR:
cwe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CO701_03600
Prokaryotic type
CO701_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ATF48292
LinkDB
All DBs
Position
719280..720329
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AA seq
349 aa
AA seq
DB search
MTEFENLTYLHGKPQGRGVLKANPEDFVVVEDLGFEPDGEGEHVLVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNVMPDLSKFELEGCKVLEYARHKRK
LRLGALKGNGFTVVLREVSDRADVEARLQAILERGVPNYFGAQRFGIAGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVNERLKKTDFNQVVDGDALQLSGRGSWFVATPEE
QVELQRRVNERELMITAALPGCGEWGTQRDALAFEQAAIADESVLQSLLLREKVDASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTTGDYAYIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtttgaaaatctgacgtatctccacggtaaaccgcagggccgtggcgtattg
aaggcgaatccagaagactttgtggtggtcgaagatttaggctttgaaccggacggagaa
ggcgaacacgttctggtacgcatcctgaagaacggctgtaacactcgttttgtcgccgat
gcactggcaaagtttttgaaaattcatgctcgtgaagtcagcttcgccgggcagaaagat
aagcatgcggtcacggaacagtggctgtgcgcgcgcgtgccgggcaatgtcatgcctgat
ttaagcaaatttgagcttgaaggctgtaaagtgctggagtacgcccgtcacaagcgtaag
ctgcgtttaggtgccctgaaaggtaacggctttacggtggtgctgcgtgaagtcagcgat
cgcgccgacgttgaagcacgtttgcaggctattctcgagcgcggcgtaccgaactatttt
ggtgcccaacgttttggcatcgccggcagtaacctgcaaggggcgctgcgctgggcgcaa
agcgatgcaccggtgcgcgatcgcaataaacgcagtttttggttgtcggcagcccgcagc
gcgttgtttaatcaaatagtcaatgaacgattgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattgtctggacgcggaagttggtttgttgccactcctgaagaa
caggttgaattacagcgtcgcgttaatgaaagagaattaatgattacagcggcattaccc
ggctgcggtgagtggggaactcagcgcgatgcgctggcgtttgaacaggccgccattgcc
gatgaaagcgtgctgcagtctttattattgcgtgagaaagtcgacgcatcgcgtcgcgct
atgctgctgtacccacaacaattaagctggaactggtgggatgacgtaaccgttgagtta
cgcttctggctaccggcaggtagctttgccaccagtgtagtaagggaacttattaacaca
acgggtgattatgcgtatattgctgagtaa
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