Citrobacter werkmanii: CO701_04960
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Entry
CO701_04960 CDS
T05129
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
cwe
Citrobacter werkmanii
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cwe03009
]
CO701_04960
Enzymes [BR:
cwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CO701_04960
Ribosome biogenesis [BR:
cwe03009
]
Prokaryotic type
rRNA helicases
CO701_04960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATF48529
LinkDB
All DBs
Position
complement(996647..997975)
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLDALQEKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADHARELAKNTHLDVATITGGVAYMNHM
EVFSENQDIVVATTGRLLQYIKEENFDCHAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGNAVKDFAERLLEDPVEVSADPSTRERKKIHQWYYRADDIEHKTALLI
HLLKQPEATRSIVFVRKRERVHELAGWLRQAGINNCYLEGEMVQSKRNEAIKRLTDGRVN
VLVATDVAARGIDIPDVSHVFNYDMPRSGDAYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKASRYVDEQLKPRVVDELRPTTRAPSEKSNGKPSKKVLAKRAEKKEKDKEKPRVKKRHR
DAKNIGKRRKPSAAAAPQSDKE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctggatgccctccag
gaaaaaggtttcactcgcccgacagctattcaggcagccgccattccacctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatatttgctg
ccagtgttgcagcacctgctcgactttccgcgcaaaaaatcaggtccaccacgcgtttta
attctgacgccgacccgtgaactggcaatgcaagttgccgatcacgcccgtgaactggcg
aagaatacgcatctggatgtcgccaccatcaccggcggcgtggcctacatgaaccatatg
gaagtgttcagcgaaaatcaggacatcgtggtcgcgaccaccggacgtctgctgcaatac
attaaagaagagaacttcgactgccatgcggttgaaacgctgatcctcgatgaagccgac
cgtatgctggatatgggcttcgcgcaggatatcgagcatattgccggtgaaacccgctgg
cgtaagcagaccatgctgttctctgccacgctggaaggcaatgcggttaaagattttgcc
gagcgcctgctggaagatccggttgaggtttctgcggatccatccacccgcgaacgtaag
aagatccatcagtggtactatcgtgccgatgatatcgaacacaaaacagcgttgctgatt
cacctgttaaaacagcctgaagcaacgcgttctatcgtctttgtgcgtaaacgcgagcgc
gtgcacgagctggctggctggctgcgccaggccgggatcaacaactgctatctcgaaggc
gagatggtacaaagcaagcgcaacgaagcgatcaaacgcctgaccgatggtcgtgtgaat
gtgctggttgccaccgacgttgcggcacgcggtatcgacattcctgatgtcagccacgtg
tttaactacgacatgccgcgcagtggcgatgcctatttgcaccgtattggccgtaccggt
cgtgcgggccgtaaaggtaccgccatttctctggtagaagcgcacgaccacctgctgctc
ggcaaagcgagtcgctatgtcgacgagcagctaaagccgcgcgtggttgacgaactgcgt
ccaacaacgcgcgcgccaagtgagaagtctaacggtaagccatccaagaaagtgctggcg
aaacgtgccgagaaaaaagagaaagataaagagaagccgcgcgtgaagaaacgtcaccgc
gatgccaaaaatatcggcaagcgtcgcaagccgagcgcagctgccgcgccgcagtctgac
aaagagtaa
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