Citrobacter werkmanii: CO701_08445
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Entry
CO701_08445 CDS
T05129
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cwe
Citrobacter werkmanii
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cwe03016
]
CO701_08445
Enzymes [BR:
cwe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CO701_08445
Transfer RNA biogenesis [BR:
cwe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CO701_08445
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ATF49171
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Position
1716983..1718110
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AA seq
375 aa
AA seq
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MNYQMITTDDALATLCEAVREFPAIALDTEFVRTRTYYPQLGLIQLFDGKHVALMDPLGI
TDWSPLRDILRDTTITKFLHAGSEDLEVFLNTFGELPQPLIDTQILAAFCGRPLSWGFAA
MVEEFTGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMAETDASGWLPAAL
DECRLMQQRRQEVLAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPEASLPEPLLNLMDM
PGYRKAFKAIKALVADVSAEHNLSVELLASRRQINQLLNWHWKLKPKSSLPELISGWRGE
LMTERLNALLLEYPQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccaaatgattaccacggacgacgcgttggccacgctgtgcgaagccgttcgt
gagtttccggcgattgccctggatactgaatttgttcgcacgcgtacctattatccgcag
ctgggactcattcagctgtttgacggcaaacacgttgctctgatggatccgctggggatc
accgactggtcgccgctgcgcgacattttacgcgacaccacgataaccaaattcctgcac
gcgggaagtgaagacctggaagtgtttctcaacacctttggcgaacttccgcagccgctg
attgatacgcaaattctggccgcgttttgcggtcgcccgctgtcgtggggatttgccgcg
atggtggaagagtttacgggcgtggcgctggacaaaagcgaatcccgtacggactggctg
gcccgaccgctgactgagcgtcagtgtgagtatgctgccgcggacgtctggtatttatta
ccgatcaccgcaaaactgatggctgaaaccgatgcctctggctggctaccggccgcgctg
gatgagtgtcgtttaatgcagcagcgtcgccaggaagtactggcgcctgaggacgcgtgg
cgtgacattaccaacgcctggcagttgcgtacccgtcagcttgcctgcctgcaactgctg
gctgactggcgactgcgtaaagcgcgtgaacgcgatctggcggtgaatttcgtggtacgc
gaagagcacctgtggtcagtggcgcgctatatgccgggtagtctgggtgagctggacagc
ctcggtctttccgggagcgaaattcgcttccatggcaagacactgatttcattggtagaa
aaagcgcaggccctgccggaagcatcgttgcctgaaccactgctgaacctgatggatatg
ccgggctaccgtaaagccttcaaagctattaaggcgctggtggctgacgtgagcgcggaa
cacaatctcagcgtggagctgctggcctcccgccgtcagatcaaccagttgcttaactgg
cactggaaattaaagccgaagtcttccttgccggagcttatttccggctggcgtggcgag
ctgatgaccgagcgacttaacgccctgttgctggaatatccacaataa
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