Citrobacter werkmanii: CO701_09110
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Entry
CO701_09110 CDS
T05129
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cwe
Citrobacter werkmanii
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cwe03016
]
CO701_09110
Enzymes [BR:
cwe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CO701_09110
Transfer RNA biogenesis [BR:
cwe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CO701_09110
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
ATF49291
LinkDB
All DBs
Position
complement(1856068..1858002)
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHSEKDRESAEPEELVEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVDH
EFKEGDWAVAEMRRHPLKGDRTFYAELTQFITFADDHFVPWWVTLARHNLEKEAPNGVAT
EMLDEGLERQDLTALNFVTIDSASTEDMDDALYVEELADGKLQLTVAIADPTAWIAEGSK
LDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTIAADGAIEDDITF
FTATIESKAKLAYDNVSDWLEGNNGWQPENDEIAEQIRLLQRICMSRGEWRHNHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHMGFD
PANAEALAALLKTHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSYAEISVE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETIARPQDDITIQMTERRRLNRM
AERDVGDWLYARFLSDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGDVVYKVTDVIDVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggacaacccgctgctagcgcagcttaaacagcaactacattcccagacgcca
cgtgctgaaggggtggtaaaagccacggaaaaaggctttggcttcctggaagtcgatgca
caaaaaagctatttcattccaccgccgcagatgaaaaaagtgatgcatggtgaccgcatt
gtcgcggtgatccatagcgaaaaagatcgcgaatctgccgagccggaagaactggttgaa
ccgttcctgacgcgtttcgtgggtaaagttcagggtaagaacgatcgtctgtccattgtg
ccagatcatccgttactgaaagacgctatcccctgccgcgctgctcgcggtgtggatcat
gaatttaaggaaggtgactgggccgtcgcagaaatgcgtcgccatccgctgaaaggcgac
cgcaccttctacgctgaattaacccagttcatcacctttgctgacgatcatttcgtcccc
tggtgggtcacgctggcgcgccacaatcttgaaaaagaagcaccgaacggcgtagctacc
gaaatgctggatgaaggtctggaacgtcaggatcttaccgcactgaacttcgtcaccatt
gacagtgccagcaccgaagatatggacgatgcgctgtacgtcgaggaactggcagatggc
aaactgcaattaaccgtcgccattgccgatcctaccgcctggattgccgaaggcagcaag
ctggataacacggctaaaattcgcgcgttcaccaactatctcccgggcttcaatatcccg
atgttaccgcgtgaactgtcagacgacctgtgctcgctgcgggctaacgaagtccgtccg
gtgctcgcttgccgcatgaccatcgcggctgacggcgctattgaagacgacatcaccttc
ttcacggcgaccatcgaatccaaagcgaaactggcctatgacaacgtgtctgactggctg
gaagggaataatggctggcagcctgaaaacgacgaaattgccgagcagatccgtctgctg
cagcgtatctgcatgagccgtggcgagtggcgtcataaccacgccctggtgtttaaagat
cgcccggattaccgctttgtactgggtgaaaaaggtgaagtgctggatatcgtggcggaa
ccgcgtcgcattgctaatcgtatcgtggaagagtcgatgattgcggcaaacatctgcgcc
gcgcgcgttcttcgcgacaaactaggcttcgggatttataacgtacacatggggttcgat
ccggcgaatgctgaagcgttggccgccctgctgaaaacccatggtatgcacgtggatgcc
gaagaggtgttgacgctggaaggcttctgcaaactgcgtcgtgaactggatgctcaaccc
tctggtttcctcgatagccgtattcgccgtttccagtcctacgctgaaatcagcgtcgag
ccaggtccgcactttgggctgggcctggaggcatacgccacctggacctcacctatccgt
aagtatggcgatatgatcaaccatcgcctgttaaaagcggtaattaaaggcgaaaccatc
gctcgaccacaggacgacatcacgatacagatgacagaacgccgtcgcctgaaccggatg
gccgaacgtgacgtcggtgactggttatacgcccgcttcctgagtgacaaagccgggact
gacacccgttttgcggctgaaatcatcgatatcagccgcggcggtatgcgggtgcgctta
gtcgacaatggcgccgtcgcgtttatcccggccccgttcctgcacgcggtccgtgatgaa
ctggtgtgcagccaggaaaacggcacggtacagatcaaaggtgatgtggtttacaaggtc
actgacgtgatcgacgtgaccatcgccgaagtgcgaatggaaacccgcagcgttatcgca
cgtccagccgcgtag
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