Citrobacter werkmanii: CO701_09640
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Entry
CO701_09640 CDS
T05129
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cwe
Citrobacter werkmanii
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cwe03009
]
CO701_09640
Enzymes [BR:
cwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CO701_09640
Ribosome biogenesis [BR:
cwe03009
]
Prokaryotic type
rRNA helicases
CO701_09640
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
ATF49381
LinkDB
All DBs
Position
1937605..1938978
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AA seq
457 aa
AA seq
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MTAFSTLNVLPAAQLENLNELGYLEMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
LLQHIDAALFQTQSLVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLEALNTLVMDEADRMLDMGFSDAIDEVIRFAPASRQT
LLFSATWPEAIAAISGRVQQNPLTIEIDTVDALPAIEQQFFETSTHGKISLLQKLLSQHQ
PASCVVFCNTKKDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLIRFANGSARVLVATDV
AARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANILSEML
QLKLNWLPAPGNGSIVPLEAEMATLCIDGGKKAKMRPGDVLGALTGDMGLDGADIGKIAV
HPMHVYVAVRQSVAHKAWKQLQNGKIKGKTCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttctactctgaatgttttacctgccgctcaactcgagaatcttaacgag
ctgggttatcttgaaatgacgcctgttcaggccgctgcgctaccggcgatcctggcagga
aaagatgttcgcgtgcaggcaaaaaccggcagtggcaaaacggccgcgtttggtcttgga
ctgttacagcacattgatgccgcgctgtttcagacgcagtcgctggtcttatgccccaca
cgtgaactggctgaccaggtcgcgggcgaactgcgtcgattagcgcgtttcctgccgaat
accaagatattaacgttgtgcggtggacaaccttttggcgcacagcgtgactctttgcaa
catgcgccacatattattgtcgccacgccgggcagattgctcgaccacctgcaaaaaggt
accgtgtcgctggaagccctgaatacactggtaatggatgaagccgatcgcatgctggat
atgggctttagcgatgccattgatgaggtgatccgctttgcgcctgcgtcacgccaaacg
ctgctgttttcggcgacctggccggaagcgattgccgcaatcagtggccgggtgcagcaa
aatccgttaacgattgaaatcgatacggtggatgcgctgccggcgattgaacaacagttt
tttgaaacctccacacacggcaaaatttcgttgctgcaaaagttgctcagtcaacatcag
ccggcatcgtgcgttgtcttctgtaacaccaaaaaagattgccaggccgtgtgcgatgcg
ttgaatgccgcggggcaaagtgcgctgtcactccatggcgacctggagcagcgcgatcgc
gatcagacgctgattcgtttcgctaacggtagcgcgcgcgtgctggtggcaaccgatgtt
gcagcacgtggcctcgatattaaatcgcttgagctggtggtgaactacgaactggcatgg
gatccggaagtgcatgtacaccgtattggacgtactgcgcgtgcgggtaacagcggcctg
gccatcagcttctgtgcgccagaagaagcccagcgtgccaatattctttctgaaatgctg
caacttaagctgaactggctacctgcacctggcaacggttcaattgtgccgcttgaggcc
gagatggcgacgctgtgcattgatggcggcaaaaaggcaaaaatgcgtccgggtgatgtt
ctgggggcattgaccggtgatatggggctggatggggccgacattggcaagattgccgtg
catccgatgcatgtctacgtggccgttcgtcagtccgtggcgcacaaagcgtggaagcag
ttacaaaacggtaagattaaaggcaaaacctgtcgggttcgtctgttgaaataa
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