Citrobacter werkmanii: CO701_16765
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Entry
CO701_16765 CDS
T05129
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cwe
Citrobacter werkmanii
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cwe03400
]
CO701_16765
DNA repair and recombination proteins [BR:
cwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CO701_16765
Archaeal homologous recombinant proteins
CO701_16765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
nSTAND3
nSTAND_NTPase5
ABC_tran
cobW
AAA_21
MobB
AAA_14
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATF50651
LinkDB
All DBs
Position
3336115..3339246
Genome browser
AA seq
1043 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKIKDKLDMTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKAARNTLEICEAQAAGVVLLSEEQQQQLQQSLQVLTDEEKILLAQQQ
HQQKDFQWVTRSDELVREQQRVASLAQQAQQALADATPELARLQLAQPANQLRPLWDRQQ
EQTARLAQTKQRIIEVNTRLHAKTSQRARIRNGALRSHEQLQTELTALAQWLAEHDRFRL
WGQEIAGWRALFSQRSRDKHQLTALAARIAELRQKLAALPENALTLTADEVAVAMEQQAQ
SRTFRQRLTSLHARYQPLQKRLRQNGESVQKAQAQQAALNETLALRRQQYKEKNQHYLDV
ETLCKQEEKIKSLEAERALLQAGQPCPLCGSTAHPAVSEYQALELSANQRRRDQLAKEVA
ALKEEGLLVLGQVNALTQQIQRETEEIQTLSQEEQALTKEWQDVCTALNITLNIQEDITG
WMGEQEHYERQLYLLSQRLTLENQLHDQQQQERQYQQQLATTHQGLESALSALSLIAPED
GTEAAWLSARETEFAQWQEKQTQHGVIQERIHALKPLLDTLPATDTAEAETVIPENWREI
HDDCVSLQSQLAAQQQQETLESERLQQSQTQFTAALAASCFADQEAFLAALLDDDTVRRL
EQLKQTLENQSQQATALSGQASQQLQAHQALRPDGLDADAQTLQARLQQLAQQLRENTTQ
QGELRQQLKQDSDNRQRQQALMQQIKEAASQVEDWGYLNALIGSKEGDKFRKFAQGLTLD
NLVWLANNQLTRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSLALAL
ALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKERIP
VQIKVKKINGLGYSKLDKMFAVE
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagcctgcgcctgaaaaacctcaactccctgaaaggggaatggaaagtc
gacttcacggcagagccttttgccagcaacggtctgtttgccatcaccgggcctacaggg
gccggaaaaaccaccttgctcgatgcgatttgtctcgcgctgtaccacgaaacaccgcgc
ctgaataccgtatcacagtcgcaaaacgacctgatgacccgcgacaccgccgagtgtctg
gcagaggtcgagttcgaagttaaaggcgaagcctaccgcgcgttctggagccagaatcgg
gcgcgcaatcagcctgacggcaatctgcaggtcccgcgcgtggaacttgcccgctgcgcc
gacggaaaaatcctcgccgataaaatcaaagataaactggacatgaccgccacgctcacc
gggctggattacggacggtttacgcgttcgatgctgctgtcgcaggggcaatttgccgcc
ttccttaacgccaaacccaaggagcgcgccgagctgctggaagaactgaccggcaccgaa
atctacggacaaatttcggcaatggtgtttgaaaaacacaaagcggcgcgcaatacgctc
gaaatatgcgaagcgcaggcggcgggtgtcgtactgttaagcgaagagcaacaacagcag
ttgcagcaaagtttgcaggtacttactgacgaagaaaaaattttgctggcgcagcagcaa
catcagcagaaagattttcaatgggttacgcgcagcgacgaactggttcgtgaacagcag
cgcgtggctagcttagcgcagcaggcccaacaggcgcttgcggacgccacgcctgagctg
gcaagactccagctcgctcagcctgccaaccagcttcgtccactgtgggatcgccagcag
gagcagactgcacgcctggcgcaaacaaagcagcggatcattgaagtaaatactcgctta
cacgctaaaacctcgcagcgcgcgcgcatccgcaacggtgcactgcgcagccacgagcaa
cttcagaccgaacttaccgcactggcgcagtggttggcggagcatgatcgattccgctta
tggggccaggagattgcgggctggcgcgcacttttttctcagcgtagtcgcgataagcat
cagcttacggcgctcgctgcccgtatcgctgagttacgccagaaactggcggcgttgccg
gaaaatgccctgacgctcaccgcggatgaggttgcggtcgcgatggaacagcaagcgcaa
tcacggactttccgtcagcgtctgacctcacttcatgctcgctatcagccgttgcaaaaa
cgtctgcgtcagaacggtgaaagcgtgcaaaaagcgcaggcgcagcaggccgcgctcaat
gaaacgctcgcgctacgccgacagcaatataaagaaaaaaatcagcactacctggacgtt
gaaacgctctgcaaacaggaagaaaaaatcaaaagtctggaggcagagcgcgcgcttttg
caggccggacagccctgcccgttatgcggctctactgcacatcctgcggtctcggagtat
caggcgctggaactgagtgcaaaccagcggcgtcgcgaccagttagccaaagaagtcgca
gcactgaaagaggaaggtctgctggttctggggcaggtcaatgccctgacacagcaaatc
cagcgtgagacagaagagatacagacgctctctcaggaagagcaagcactcactaaagag
tggcaggacgtttgcaccgctctgaatattacgctgaatattcaggaggatattaccggt
tggatgggcgaacaggagcactacgagcgccagctttatctgctcagccagcgcctgacg
ctggaaaaccagttacacgatcagcaacaacaggaacgccagtatcaacaacagctggcg
acgacgcatcaggggctggaaagcgccttgtccgcgctgtcactgattgcaccggaagac
ggcacagaggccgcctggttaagcgcccgcgaaaccgaattcgcgcagtggcaggagaaa
cagacgcagcatggcgtgattcaggaacgcattcacgccctgaagccgctgctcgacacg
cttccggcaacggacaccgcagaagccgaaacggttatccctgaaaactggcgcgaaatt
cacgacgactgcgtgtcgctgcaaagccagcttgctgcacagcaacagcaggaaacgctg
gaaagcgaacgcttgcaacagtcacagacgcaatttaccgccgccctggcggccagttgc
tttgccgatcaagaggcgttccttgccgcgctgctggatgacgataccgtccgccgcctt
gagcagttaaaacagacgctggaaaatcaatcgcagcaggcaacggcgctgtccgggcaa
gccagtcaacaactgcaggcgcatcaggcgctgcgcccggacgggctggacgccgacgca
caaaccctgcaagcccggctgcaacaactggcgcaacaactgcgagagaacaccacccaa
cagggggagttacgccagcagcttaagcaggacagcgataaccgccagcgtcagcaggca
ttaatgcagcagattaaagaggcggccagccaggtcgaagactggggctatctaaatgcg
ctgattggctcgaaagaaggggataaattccgcaagtttgcccaaggtctgacgctggat
aacctggtgtggttggctaacaatcaactgacccgcctgcacggtcgctatctgctacag
cgaaaagccagcgaagcgctggagctggaagtggttgatacctggcaagccgacgccgtt
cgcgatacccgcacgctgtccggcggtgaaagcttcctggtaagtctggccctggcactg
gcactgtccgatctggtcagccacaaaacgcgcattgactccctgttccttgatgaaggt
tttggcacgctggacagcgaaacgctggataccgcgttggacgcactggatgcgctaaat
gccaccggcaaaaccattggcgtcataagccacgtcgaggccatgaaagagcgcattccg
gtgcaaatcaaggtgaagaaaatcaacggactgggttatagcaaactcgacaagatgttt
gcggtggagtag
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integrated database retrieval system
