Citrobacter werkmanii: CO701_22185
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Entry
CO701_22185 CDS
T05129
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cwe
Citrobacter werkmanii
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cwe03032
]
CO701_22185 (gyrB)
03400 DNA repair and recombination proteins [BR:
cwe03400
]
CO701_22185 (gyrB)
Enzymes [BR:
cwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CO701_22185 (gyrB)
DNA replication proteins [BR:
cwe03032
]
Prokaryotic type
DNA Topoisomerases
CO701_22185 (gyrB)
DNA repair and recombination proteins [BR:
cwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CO701_22185 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
ATF51614
LinkDB
All DBs
Position
4493096..4495510
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIRREGKVHQQTYVHGVPQAPLAVTGETEATGTQVRFWPSHETFTNVV
EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIRAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHTNAHAPALAGEALEKLVSEYNATQKMIGRMERR
FPRSLLKELVYQPTLAEADLADEEKVTAWVSQLVNVLNENEMHGSTWNSFVRKDAELNLF
EPVIRVRTHGVDTDYPLEHEFVTGGEYRRLCTLGEKLRGLIEDDAFIERGERRQPVTSFE
QALDWLVKESRRGLSIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaaggactggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctacaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagatatcgtg
gtgacaatccacgctgacaactccgtgtccgttaccgatgatggtcgtggtatcccaacc
ggtatccacccggaagagggcgtttcggcggccgaagtgatcatgaccgtcctgcacgca
ggcggtaaattcgatgataactcctataaagtctccggcggtctgcacggcgtgggtgtt
tccgtggttaacgccctgtcgcagaaactggagctggtgattcgccgcgaaggtaaagtg
caccagcaaacttacgtgcacggcgtaccgcaggcaccactggccgtgactggcgagact
gaagcgaccggtacccaggtacgtttctggccaagccatgaaacctttaccaatgtcgtt
gagtttgaatatgagattctggcgaaacgcctgcgcgagctgtcattcctgaactccggc
gtatccatccgcctgcgcgacaagcgcgacggtaaagaagatcatttccactacgaaggt
ggcatcagggcgtttgttgaatacctcaacaaaaacaaaacgccgatccacccgaatatc
ttctacttctccaccgaaaaagacggtattggcgtcgaagttgcgctgcagtggaacgat
ggtttccaggaaaacatctactgcttcaccaacaacattccgcagcgtgatggcggtact
caccttgcaggcttccgtgcggcgatgacccgtaccctgaacgcctacatggacaaagaa
ggctacagcaaaaaagcgaaagtcagcgccaccggtgacgatgcccgtgaaggcctgatt
gctgtcgtttccgtgaaagtaccggatccgaaattctcctcccagaccaaagacaagctg
gtctcctccgaggtgaaaaccgcagtagaacagcagatgaacgaactgctgagcgaatac
ctgctggaaaacccgtctgacgcgaaaatcgtcgtcggtaaaattattgatgcggcacgt
gcccgtgaagcagcacgtcgtgcacgtgaaatgacccgtcgtaagggtgcgctggactta
gctggtctgccgggcaaactggcggactgtcaggaacgcgacccggcccactctgaactg
tacctggtggaaggggactcagcgggcggctctgcgaagcaggggcgtaaccgtaagaac
caggcgattctgccgctgaagggtaaaatccttaacgttgagaaggcgcgcttcgacaag
atgctctcttctcaggaagtggcaacgctgattaccgcgctcggctgcggtatcggtcgc
gacgaatacaacccggataaactgcgttatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacattcgtacgttgctgttgaccttcttctatcgtcagatgccggaa
atcgttgaacgcggccacgtctacattgcacagccaccgctgtacaaagtgaagaaaggc
aagcaggaacagtacatcaaagacgatgaagcgatggatcagtaccagatctctattgct
cttgatggcgccacgctgcacaccaatgcccacgctccggcgctggcgggggaagcgctg
gaaaaactggtgtctgaatacaatgccacgcagaaaatgattggtcgtatggagcgccgc
ttcccgcgctcgttgctgaaagaactggtttatcaaccgacgctggccgaagccgatttg
gctgatgaagagaaagtcacggcctgggtttcccagctggtgaacgtgctgaatgaaaac
gaaatgcacggtagcacctggaatagctttgtacgtaaagacgccgagctgaacctgttt
gaaccggttatccgcgtgcgtacccacggggtcgataccgactatcctctggagcatgag
tttgtgaccggcggtgaataccgtcgtctctgcacgctgggtgagaaactgcgtggcctg
attgaagacgatgcgtttatcgaacgtggtgagcgtcgtcagccggttaccagcttcgag
caggcgctggactggctggtgaaagagtcccgccgtggtctgtctattcagcgttataaa
ggcctgggcgaaatgaacccggatcagctgtgggaaaccaccatggatccggaaagccgt
cgtatgctgcgtgtgacggtgaaagacgcgattgctgccgaccagttgttcactacgctg
atgggcgacgccgttgaaccgcgtcgtgcgtttatcgaagagaacgccctgaaagcggca
aatatcgatatttaa
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