Citrobacter werkmanii: CO701_22370
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Entry
CO701_22370 CDS
T05129
Name
(GenBank) transcriptional regulator
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
cwe
Citrobacter werkmanii
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cwe03000
]
CO701_22370
Transcription factors [BR:
cwe03000
]
Prokaryotic type
Helix-turn-helix
Other families
CO701_22370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
AAA
AAA_16
Mg_chelatase
NACHT
AAA_14
AAA_2
HTH_Crp_2
IstB_IS21
AAA_25
TrmB
AAA_33
AAA_24
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ATF51648
LinkDB
All DBs
Position
4531956..4534754
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AA seq
932 aa
AA seq
DB search
MRRIEVILGELERLTRGLNLANLAQETAFTAEAIGFNLGLARNSVSKDLNQLWNDGLAIK
SRGRPVFFLHRQAIEMLLDRTLDESEREVRSVADLIAHQESLVSDDPFIGLIGYDRSLRD
AVEKGRAAVLYPHGLHVMLTGPSGVGKTFFAELMHRFACERVTGMPPPLVYFNCAEYAHN
PELLSSHLFGHRQGAFTGANENKPGLVEQADGGYLLLDEVHRLPYEGQEKLFSILDKGEY
RPLGSSAAARSISVRLICATTEPVSSALLRTFQRRIQVCIDLPGIRQRSIEEQVELIVGF
LQRESRKIERTVSIDKTLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTERSDTLQLD
KRLAEMPFNATPEQRQLVDVLFGGTERLSVDARTLPALKNSLATGAEIEDSDLFYSFLTR
EYVNLRNSNVPPAETLAILKNKLSSIFDYGLYSRDNVAHPPRYGDQIEERVTLLIGCVEQ
VLGFTLPENLVNPLRKHLLALIGYVQRGLIPQLYSSSLILDRCKDEYDNATLLCRKINEL
LHIQCPATEVVWLCLFLKECRHYRQRIDASPDCGVVLIAHGATTATSQAQYVNRVLEREL
FSAIDMPFEQSVHDTLEALTRMIRTRQYRRLILMVDIGSLIHFGSTISKLFQIDVLLMPN
ITLTSLLELGLDLSYETSDLTQLAALMQSKDIPCQLCTPQQENGGKVLVISCITGMGTAE
KIKKVLEESFGELMSQDTRMVILDYNEVRSLERVQQAINASERLAGIVGTFQPGLPDIPF
ISLEELFSEQGPELVLSLLTPDLSSSERRLEMERSAMRFISALTMESIINHISVLNPQRI
LKEMEGVLNHLMAALLLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALENKPDLDAHAF
SVIKSAFQPIEEAYAIRLSDAEYFYIYELLYS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggattgaggtaatactgggggagctggaacggctgacgcgtgggcttaatctt
gccaatttggcgcaggaaacggcattcaccgcggaggctataggctttaaccttggactg
gcgcgtaattctgtcagtaaagaccttaatcagctatggaacgatggcctggcgattaaa
agtcggggccgtccggtgttcttcctgcatcgtcaggcaattgaaatgttgctggatcgc
acgctggatgagtccgaacgcgaagtgcgttcggtcgccgatctcatcgctcatcaggag
agtctggtctctgacgatccctttatcgggcttatcggctacgatcgcagcctgcgtgat
gcggtggaaaaaggtcgagcggcggtactctatcctcatggtctgcatgtcatgctgact
ggtccctctggcgtcggcaaaaccttttttgctgagctgatgcatcgctttgcctgcgaa
cgtgtgacgggaatgccgccaccgctggtttattttaactgtgcagaatacgcgcataac
ccggaactgctttcctcacatctgtttggtcatcgccagggggcatttaccggagcaaac
gagaataaacccggtctggtcgaacaggctgatggtggttatctgttactcgatgaggtc
catcgactgccgtatgaagggcaggaaaagctgttctccattctcgataagggtgaatac
cggcctctgggttcgagcgctgcggcgcgctcaatttcggttcgcctgatctgtgcgacg
actgaacccgtcagttcggcgctgctacgcacctttcagcggcgtattcaggtctgtatc
gatttgcccggtattcgccagcgttcaatcgaagagcaggttgaattaattgttggtttc
ttacagcgtgagagccgtaaaattgaacgcacggtaagcatcgacaaaacgctgctgctc
tggctgctgaacaaaccgctggaaggcaatattggccagctcaagagcgatattcagttt
ctgtgcgcccaggcgtgggcatcagggatgacggagcgcagcgacacgctacagctggac
aaacggctcgcagagatgccgtttaacgccacgccggaacaacgtcagttggttgatgtg
ctgtttggcggtacagagcgtctgagcgtggatgcgcgcacgctcccggcactaaaaaac
tcgctggcaaccggggcggaaattgaagacagcgatctcttttacagcttcctgactcgt
gaatacgtcaatctgcgtaacagcaacgtgccgcccgccgaaacgctggcgatacttaaa
aacaagctcagctccatatttgattacggtctttacagtcgcgataacgtagcgcatccc
ccgcgctatggtgaccagattgaagaacgggtgacgttactcatcggctgtgttgaacag
gtgctgggctttacgctgccggaaaacctggtgaacccgctgcgcaagcaccttctggcg
ctgattggttatgtgcagcgcggacttatcccgcagctttactcctccagcctgatcctt
gatcgctgcaaagatgaatacgacaacgccacgctgttgtgccgaaaaatcaatgaactg
ctgcatattcagtgcccggcgacggaagttgtctggctgtgtttgttcctgaaagagtgt
cgccattaccgacagcgcatcgacgccagccccgactgcggtgtggttttaattgcccac
ggtgccaccaccgccacgagtcaggcgcagtacgtgaaccgtgtgctggagcgtgaattg
ttcagcgctatcgatatgccgtttgagcaatcagtgcatgacacgctggaagcgctgacc
cggatgattcggacccggcaatatcggcgattaatcctgatggtggatatcggctcactg
attcattttggtagcaccatcagcaagttatttcagatagatgttctattgatgccgaat
atcaccctgaccagtctgctggaattgggtctggatttaagctatgaaaccagtgactta
acgcagctggcggcgttaatgcagagtaaagatatcccctgtcagctctgcacgccgcag
caggagaacggtggcaaagtgctggtcatctcctgcattaccggcatgggcacggcggaa
aaaatcaaaaaggtgctggaggagagctttggcgaactgatgtcgcaggatacgcggatg
gtgatcctcgattacaacgaagtgcgcagtctggagcgcgtccagcaggcgataaacgcc
agcgaacggctggcggggatagtcggcacttttcagccggggctaccggatattccgttt
atttcgctggaagagctgttctccgagcaggggccagaactggtgctgagcctgctgacg
cccgatctctccagcagcgaacgtcgtctggagatggaacgcagcgccatgcgctttatc
agcgcgctgaccatggagagcatcatcaaccatatttcggtgctcaatcctcagcgtatt
ctgaaggaaatggaaggcgtgcttaaccacctgatggctgcacttttgctgaaaccgagc
cgtcaggtgacactgcgcttcctgatccactgctgttgtatggtcgagcgtatcgtgatt
aaccgcaaaccgttacagatggcgcttgaaaacaagccggacctggacgcccacgcgttt
agtgtcattaaatccgctttccagccgatcgaagaggcctacgccattcgtttatcagac
gcggaatatttttatatctacgaactgttatatagctga
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