Chryseobacterium wangxinyae: PGH12_02280
Help
Entry
PGH12_02280 CDS
T11581
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
cwg Chryseobacterium wangxinyae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
AAA
AAA_19
AAA_7
Mg_chelatase
AAA_30
nSTAND3
IstB_IS21
AAA_22
TsaE
T2SSE
nSTAND6
AAA_16
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
WBZ95983
LinkDB
All DBs
Position
513217..514569
Genome browser
AA seq
450 aa
AA seq
DB search
MNTVLIIDDEAKIRSLLSRIINLEGFEVFEAGNLKSGLKRLEISDIDIVLCDVKLPDGSG
VDFSKTVKDQFPGVEIILLTAFGNIPDGVMAIKNGAFDYITKGDDNTKILPLLYKAAEKV
ALNKRVLQLEKQLDSKQSFKSIIGKSTEITSAISSAQKVAVTDATVLLTGETGTGKEVFA
QAIHHASNRNKKNFIAVNCSAFGKELLENELFGHKAGAFTGALKDSKGIFEEANLGTVFL
DEIGEMPLDLQAKLLRVLESGEFLKVGDSKPTKTDVRIIAATNRNLETEIENGNFREDLY
YRINIFNIKLPSLRERVADIESLASFFLKTFSQKMGKNITAFSDDYLKALKNHQWKGNIR
ELRNVIERSVILTDSSELSIDSLPVDILVQKEQTEFSQNKMISAFSMASAERMQIQKILK
HTNGNKAEAARLLEIGIATLYRKIEEYSIS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacagttttaatcattgatgatgaagcgaaaataagatcactattatcccgcatc
atcaatctcgaaggttttgaggtctttgaggcgggaaatcttaaaagcggactcaaaaga
cttgaaatctcagatattgatattgttctttgtgatgtaaaacttcccgacggaagtggt
gtagacttttcaaagacagtaaaagatcaattccctggggtagaaattatacttcttact
gctttcggaaatattcctgatggtgtaatggcaatcaaaaacggtgcgttcgattatatc
actaaaggggacgacaataccaaaattttgcctttactttataaagctgcggagaaagtt
gcacttaataaaagagttttgcaacttgaaaaacagttggattctaaacaatcttttaaa
agcattatcggaaaatctactgaaattaccagcgcaatttcatcagctcagaaagttgct
gttaccgacgctacagttctgctcacaggagaaactggtaccggaaaagaagtttttgca
caggctatccatcatgcaagcaacagaaacaagaaaaattttattgcagttaattgctcg
gctttcgggaaagaattgctggaaaatgaattgttcggtcataaagcaggagcttttaca
ggagctttaaaagattctaaaggtatttttgaagaagccaatctcggaactgtttttctt
gacgaaataggtgaaatgcctttggatcttcaggcaaaattattacgagttttagaatct
ggtgagtttctgaaagtaggagacagcaagcctacaaaaactgatgtaagaatcatcgcc
gcaaccaacagaaatctggaaacagaaattgaaaacggaaacttccgtgaagatttgtat
tatcgtatcaatatttttaatattaaacttccatctttacgagaaagagtagcagatatc
gaatcactcgccagttttttcctcaagaccttttctcagaaaatgggcaaaaatattact
gctttttccgatgattatttaaaagccttgaaaaatcatcaatggaaaggcaatatccgt
gaactgcgaaatgttattgaaagaagtgtaatcctcacagattcatctgaattatcaata
gacagccttccggtagatattcttgtacaaaaggaacagacagaattttcacagaacaaa
atgatatcagcattttctatggcaagcgcagagcgtatgcagattcagaaaatattaaaa
cataccaacggaaataaagccgaagcagcgcggcttttggaaattggcatcgcaacactt
taccgaaaaatcgaagaatacagtatttcgtaa
DBGET
integrated database retrieval system
