KEGG   Corynebacterium wankanglinii: IA203_07980
Entry
IA203_07980       CDS       T08053                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
cwk  Corynebacterium wankanglinii
Pathway
cwk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cwk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    IA203_07980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cwk03400]
    IA203_07980
DNA repair and recombination proteins [BR:cwk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IA203_07980
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      IA203_07980
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran AAA_21 SMC_N AAA_29 DnaJ_CXXCXGXG nSTAND1 AAA_16 AAA_25 ATPase RsgA_GTPase AAA_33 AAA_22 Anti-TRAP Viral_helicase1 Lar_restr_allev DUF87 FtsK_SpoIIIE HUTI_composite_bact Zn_ribbon_LysW
Other DBs
NCBI-ProteinID: QNP93763
LinkDB
Position
complement(1600913..1603333)
AA seq 806 aa
MTGIKVRDAHLHNLRNVDVDIPRGTLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPF
ARRLIGSAVDPQVGSVEGLPPTVALEQSTSGGGARSTVGTVSALSNSIRLLYSRAGDNPK
GLYSDSFSPNTPEGMCPTCQGTGVVHEPTEESMVPDPTLSIEDGAIQAWPGAWAGKNFHD
ILATLGYDLDSPWQDLPKDDREWILFTEERPVVTVKPLRGEDQIQRNYKGTWRSVASYLT
NTLAETQSDTLRKRVLSYMESRVCETCHGRRLNPEALKVTYAGMPIDELGALPLDQVHSV
LAAQEPADGTAEDLLLKQILPALQSALDLGLAHLSLDRPAPTLSAGELQRIRLSAQLRSG
LFGVAYVLDEPSAGLHPSERGAVLEICRRFIDAGNSVLLVEHDMELVAQTDYLVDVGPLA
GERGGEVVYAGPTSEYTGDAPTARALANRTLSLNDAPRSATGELTLSGVHARSIEGLDVS
FGMGQFTAVAGVSGSGKSTLVSTVLASVLREAASTVVEEDDDAADGAGAGEAGWNVDKQE
GFDAVSRVVQITQKPIGRTPRSTLATYTGLFDGVRKLFASTDEAKRRKWTVSRFSYNVKQ
GQCPTCGGAGKIEVELVFLPGSYTTCPDCGGARYNDETLEVTWEGFNIAQVLDLTVDEAA
DVFTDEPKILRAVETLQAVGLGYLRLGQGAPELSGGEAQRIKLATELQRSRNSRRGHTVY
LLDEPTTGLHPADVALLTKELNSLVDAGQTVIVVEHDLSVIAQADRVIEMGPGAGADGGQ
IVATGSPAELAERDTATGKVLAERSA
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgactggtatcaaggttcgagacgcccacctgcacaacctccgcaacgtggatgtggac
atcccgcgcggcacgctcgtggcggtgaccggggtgtccggctccggtaagtcttctctg
gcgttcggcactatccacggcgaaggccagcggcgctacctggagtcggtcgcgccgttt
gcccgcaggcttatcgggtctgcggtggacccgcaggtcggttccgtggagggcctgccg
ccgacggtggcgctggagcagtccacctccggcggcggcgcgcgctcgaccgtgggcaca
gtttccgcgctgtccaacagcatccgcctgctgtactcgcgcgcaggcgacaacccgaag
gggctgtactccgactcattttccccgaacacgccggagggcatgtgcccgacgtgccag
ggcaccggtgtggtgcacgaacccaccgaggagtccatggtgccggacccgacgctgtcc
atcgaggacggcgcgatccaggcctggcccggcgcgtgggcgggcaaaaacttccacgac
atcctggcaacgctcggctatgacctggattcgccctggcaggacctgccaaaagatgac
cgtgagtggatcctgttcaccgaggagcgccccgtggtcaccgtcaagcccctgcgcggc
gaggaccagatccagcgcaattacaaaggcacgtggcgttccgtggcgtcgtatttgacc
aatacgctcgccgaaacccagtccgatacgctgcgcaagcgcgtgctgtcctacatggag
tcgcgcgtctgcgagacctgccacggccgccgcctcaacccggaggccctcaaggtgacc
tacgcaggcatgcctatcgacgagctgggcgctttacccctcgaccaggtgcactccgtg
ctcgccgcgcaggaaccagcggacggtaccgcagaggatctgctgctcaagcagatcctg
cccgcgctgcagtccgcgcttgacctgggcctggcgcacctgagtctggatcgtcccgcg
ccgactctgtccgccggtgagctgcagcgaatccgcctgtccgcccagctgcgttccggt
ttgtttggcgtggcgtacgtgcttgacgagccgtccgcgggcctacacccctccgagcgc
ggcgcggtactggaaatctgccgccggttcatcgacgccggtaactccgtactcctggtc
gagcacgacatggagctggtggcccagactgattacctggttgacgtgggcccgctcgca
ggcgagcgcggcggcgaagtggtgtacgcgggtcccaccagcgagtacaccggtgatgcg
cctaccgcgcgcgcccttgccaaccggactctgtcgttgaacgacgccccccggtccgcc
accggcgaactgaccctgtccggcgtgcacgcccgctccatcgagggcctcgacgtgtcg
tttggaatgggtcagttcaccgctgtggcgggcgtgtccggctccggtaagtccacgctg
gtgagcaccgtgctcgccagtgtgctgcgggaggcggcgtccaccgttgtcgaggaggac
gatgacgcggcggacggcgctggggcgggggaggccggatggaacgtcgataagcaagaa
ggcttcgatgctgtcagccgcgtggtacagatcacccagaaacccatcgggcgcacgccg
cgctcaacgctggcgacgtacaccgggctctttgacggcgtgcgcaagctgttcgccagc
accgacgaggcaaagcgccgcaagtggaccgtgtcgcgcttttcctacaacgtgaagcaa
ggccagtgcccaacctgcggcggcgccggcaagatcgaggttgagctggtgttcctgccc
ggctcctacaccacctgcccggactgcggcggtgcgcgctacaacgacgagacgttggag
gtgacctgggagggattcaatatcgcgcaggtgctcgacctcaccgtcgacgaggccgcg
gacgtgttcaccgacgagccgaagattctgcgtgctgtggaaaccctgcaagcggtgggg
ctgggctacctgcggctcgggcaaggcgcgccggagctttccggcggtgaggcgcagcgc
atcaagctggccaccgagctgcagcgctcccgcaactcgcgccggggccacaccgtgtac
ctgctggacgagccgaccaccgggctgcacccggccgatgtcgcgctgctgaccaaggaa
cttaacagccttgtcgacgcggggcagaccgtgatcgtggtcgagcacgacctctccgtg
atcgcgcaagctgaccgcgtgattgagatgggcccgggcgccggcgccgacggcgggcag
atcgtcgctaccggctccccagccgagctggccgagcgcgacaccgccaccggaaaggtg
ctggcggagcgatcagcgtag

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