Corynebacterium wankanglinii: IA203_09320
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Entry
IA203_09320 CDS
T08053
Name
(GenBank) translation initiation factor IF-2 N-terminal domain-containing protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cwk
Corynebacterium wankanglinii
Pathway
cwk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IA203_09320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwk03019
]
IA203_09320
03009 Ribosome biogenesis [BR:
cwk03009
]
IA203_09320
Enzymes [BR:
cwk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
IA203_09320
Messenger RNA biogenesis [BR:
cwk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IA203_09320
Ribosome biogenesis [BR:
cwk03009
]
Prokaryotic type
rRNA processing factors
IA203_09320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
Motif
Other DBs
NCBI-ProteinID:
QNP94980
LinkDB
All DBs
Position
complement(1882998..1885799)
Genome browser
AA seq
933 aa
AA seq
DB search
MKKTGKKAAPQAQPADNPYAAFDRSQLADKTRVFTLAKALGVPSKELVVALSELGVVKVA
QSTLTRAESEQLLDALAATAPEHPDTPAADDVADEKIRQRVRKDVENEIHQIEEKVEADL
RDPAEEDPLIDVEPAVTPVPEEATNRAPLFKAPDRKRRRATRAAAPTQEEQQRDDVASPE
GEPEDVERHEPEPIEEPKAIKGSSRLEAQRRRRTEKREEQRKRSRIVSQAEFLARRESVE
RHMVVRERDRHDGHGKITQVAVLEDGLLVEHFVTAESQSSMIGNIYLGRVQNVLSSMEAA
FIDIGQGRNGVLYASEVDWKSAGLGGRSRRIEQALKSGDQVLVQVTKDPVGHKGARLTTQ
ISLAGRYLVYVPGGRSAGISRKLPAPERKRLKEILNNVVPGKGGAIIRTAAENVPEEAIA
ADVNRLHNQWTAIQEQAEKEKSSKGAKPVTLYEEPNILVKVVRDLFNEDFTSLIVDGRKP
WNTVHAYVQSVAPDLLDRVEKFDRDAHDGKDAFEVHRIDEQLQKALSRTVWLPSGGTLVI
DRTEAMTVIDVNTGKFTGSGGSLEETVTSNNLEAAEEIVRQIRLRDIGGMIIIDFIDMIL
PENQELVLRRLNEALGRDRTRHQVSEVTSLGLVQMTRKRLGNGLLETFSTECECCGGRGI
IVTDDPVEHDPYSERGRDERRATRSRDKDAAQDGGREGDRDGGREHKSRSQRRSKRKPLN
DDEMDNLLNSIFSDEDPAQEDTPTDADSRGDAGATGPDGSLDDDADGRRRSSRRRGRRGG
SRGRGKQPEAQDQQKRQPAPEDATHDVPAQEPQPSYEDAVEEFENSPRRKRRTRGNSRSD
HRPRREDFAEPEQAQEDTRTEERANASAPAKPSASRRGRRRAVRKSNASVAAERATAQTT
QGGGKEDAGAAERRREAQASPRRGRRRATRRSS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagacggggaagaaggcggcgccgcaagcgcagccggcggacaacccgtacgcg
gcgttcgaccgctcgcagctggcggacaagactcgcgtgtttaccctggccaaggcgcta
ggagtgccgtctaaggagctcgtggtggcgctgtccgagctgggcgtggtcaaggtggcg
cagtccacgctgacgcgggcggaaagcgagcagcttctcgacgccttggcggccaccgcc
ccagagcaccccgacaccccggcagcagacgacgttgcggatgagaagatccgccagcgc
gtgcgcaaagacgtggaaaacgagatccaccagatcgaggaaaaggtcgaggcggatctg
cgcgatcccgccgaggaggatccgctcatcgacgtggagcctgcggtcacccccgtcccg
gaggaggccaccaaccgggcgccgctgttcaaggctcccgaccgcaaacgccgccgcgcc
acccgggctgcagcgccgacgcaggaggagcagcagcgtgacgacgtcgcttcgccggag
ggggaaccggaggacgtcgagaggcacgagcccgaaccgatcgaggagccgaaggcgatc
aaggggtcctcgcgcctggaagcccagcgccgacgccgcaccgaaaaacgcgaggagcag
cgcaaacgctcccgcattgtgagccaggcggagttcctcgcccgccgcgagtccgtggag
cgccacatggtggtgcgcgagcgcgaccgtcacgacggccacggcaagatcacgcaggtc
gctgtgctcgaggacggtctgctcgtcgagcattttgtcacggcggagagccagtcctcc
atgatcggcaacatctacctcgggcgtgtgcagaacgtgctgtccagcatggaggcggcc
ttcatagacatcgggcagggccgcaacggcgtgctctacgccagcgaggtggactggaaa
tccgcaggtctcggcggacgttcgcgccgcatcgaacaggcgctcaagtccggcgaccaa
gtgctggtgcaggtgaccaaggacccggtcgggcacaagggcgcgcggttgaccacgcag
atctccctggcaggccgctacctggtgtacgtgccgggcggtcgcagtgccggcatctcc
cgcaagctgccggcgccggagcgcaagcgcctgaaagagatcctgaacaacgtggtgccc
ggcaagggcggggcgatcatcagaacggccgcggagaacgtgccggaggaggcgatcgcc
gccgacgtgaaccgcctgcacaaccagtggaccgcgatccaagagcaggcggagaaggaa
aagtcgtcgaaaggcgccaagccggtcaccttgtacgaggagccgaacatcctggtcaag
gtcgtgcgcgacctgttcaacgaggacttcacgtccctcatcgtggatgggcgcaagccg
tggaacaccgtgcacgcctacgtgcagtccgtcgcaccggacctgctggaccgtgtggag
aagttcgaccgcgacgcgcacgacggcaaggacgcttttgaagtccaccgcatcgacgag
cagctgcaaaaggcgctgtcgcgcaccgtctggctgccctccggcggcacgctcgtgatc
gaccgcaccgaggcgatgaccgtcatcgacgtcaacaccggcaagttcaccggctccggc
ggctcgttggaggagaccgtgacctccaacaacctcgaggccgccgaggagatcgtgcgg
cagatccgcctgcgcgacatcggcggcatgatcatcatcgacttcatcgacatgatcctc
cccgaaaaccaggagctcgtgctgcgccgcctcaacgaggcgctcgggcgtgaccgcacc
cgccaccaggtctccgaggtgacctcattgggcctggtgcagatgacccgcaagcgcctt
ggcaacgggcttttggagaccttctctaccgagtgcgagtgctgcggcggccgcggcatc
atcgtcaccgacgacccggtggagcacgacccgtactccgagcgcggccgcgacgagcgc
cgcgcaacccgcagccgtgacaaagacgctgcccaggacggcggccgcgagggtgaccgt
gacggcggccgcgagcacaagtcgcggagtcagcgtcgctccaagcgcaagcccctcaac
gacgacgagatggacaacctcctcaactccatcttcagcgacgaggaccccgcccaggag
gacacgcccaccgacgcggattcgcgcggtgatgccggggcgacggggccggacggctcg
ctcgacgacgacgcggacgggcgccgccgctcgtcgcggcgccgcggacgccgtggtggc
agccgcgggcgcgggaagcagccggaagcgcaggaccagcaaaagcgccaaccagcgccg
gaggacgccacccacgatgtgccggcgcaggagccgcagccgagctacgaggacgcggtg
gaggagttcgagaactcgccgcgccgcaagcgccggacccgcggcaactcccgctcggac
caccgccctcgccgcgaggacttcgcagagcccgaacaggctcaggaggacacgcgcacc
gaggagcgtgcgaatgcatccgcgccagcgaagccatccgctagccgtcgaggccggcgc
cgcgcggtgcgcaaatccaacgcctcggttgcggcagagcgtgcaaccgcccaaaccacc
cagggcggcggcaaggaagatgcgggtgctgcggaacggcgtcgagaagcacaggcttcc
ccgcggcgcggacggcggcgcgctacgcgacgcagcagctag
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