Conexibacter woesei: Cwoe_0825
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Entry
Cwoe_0825 CDS
T01153
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cwo
Conexibacter woesei
Pathway
cwo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cwoe_0825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwo03019
]
Cwoe_0825
03400 DNA repair and recombination proteins [BR:
cwo03400
]
Cwoe_0825
Enzymes [BR:
cwo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cwoe_0825
Messenger RNA biogenesis [BR:
cwo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cwoe_0825
DNA repair and recombination proteins [BR:
cwo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cwoe_0825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
ResIII
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ADB49258
UniProt:
D3FAI9
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All DBs
Position
864628..866424
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AA seq
598 aa
AA seq
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MIAATDPREALHRHFGFDDFRPGQAAAVGAALDGRDALVVMPTGAGKSLCYQLPALVRDD
LTLVVSPLVSLMQDQVESLARIAPGSVALLNSQQSAAENRVALARAVSGDLRLLYVAPER
FASPGFVAQIERARIGLFVVDEAHCVSQWGHDFRPDYFRLADAARYLRARAIMALTATAT
PRVADDIAARLGLAEPVRVTTGFDRPNLSFAVVPCRSKQDKHRRIAAVLHDLESRPAIVY
AGTRNGCEELARSLGRTLELDVAVYHAGLPRDRRAAVQRAFMAGDTPIVVATNAFGMGVD
KADVRTVCHETVPQSVEAYYQEAGRAGRDGRPARCLLFSESRDKGLHVFFIERTQVEDAA
FGAVARRIHRQAGDNGRYELDLGVLADVAGCDRDQARAIVGHLARAGLVQPAPSPPDRTI
GRLVGSWDRSALLACRESAGEAQRVRWRQYRSIWAFVEQRRCRRGALLRHFGDRARPLTA
RGVPCCDVCRPEIAPGPAARAGGSSARDSVRQAGSSRGTVGLDETILELVASAEPPVGRA
RAVEILRGSRSKAIDEHSYDGLPAYGTFAHLRGEEVMQRVDMLNARGALPRLRRSTRG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgctgcgaccgacccccgcgaggcgctgcaccggcacttcggcttcgacgacttc
cgccctgggcaggccgccgcggtcggtgccgcgctcgacggccgtgacgcgctcgtcgtg
atgccgacgggcgccggcaagtcgctctgctaccagctgccggcgctcgtccgcgacgac
ctgacgctcgtcgtctcgccgctcgtctcgctgatgcaggaccaggtcgagagcctcgcg
cggatcgcgccgggcagcgtcgcgctgctcaactcgcagcagagcgcggcggagaaccgc
gtcgcgctggcgcgcgccgtctccggcgacctgcggctgctctacgtcgcgccggagcgg
ttcgcctcacccggcttcgtcgcgcagatcgagcgcgcgcggatcggtctcttcgtcgtc
gacgaggcccactgcgtctcgcagtggggccacgacttccggcccgactacttccgcctc
gccgacgccgcgcgctacctcagagcgcgcgcgatcatggcgctgacggcgaccgccacg
ccgcgcgtcgccgacgacatcgccgcgcggctggggctcgccgagccggtcagggtgacg
accggcttcgaccgcccgaacctcagcttcgccgtcgtcccgtgtcgctccaagcaggac
aagcaccggcgcatcgcggccgtgctgcacgacctcgaatcgcgtccggcgatcgtctac
gccggcacccgcaacggctgcgaggagttggcgcgctcactcggccgcacgctggagctg
gacgtcgccgtctaccacgccggcctgccgcgcgaccgccgcgccgccgtccagcgcgcc
ttcatggcgggcgacacgccgatcgtcgtcgccacgaacgcgttcggcatgggcgtcgac
aaggcggacgtgcggaccgtctgccacgagaccgtcccgcagtcggtcgaggcgtactac
caggaggccgggcgcgccgggcgcgacggcagaccggcgcgctgcctgctcttctccgag
tcgcgcgacaagggcctgcacgtcttcttcatcgagcgcacgcaggtcgaggacgccgcc
ttcggcgccgtcgcgcgcagaatccaccggcaggcgggcgacaacggccgctacgagctg
gacctcggcgtgctcgccgacgtcgccggctgcgaccgcgaccaggcacgcgcgatcgtc
ggccacctcgcgcgcgcgggactcgtgcagccggcgccgtcgccgccggaccgcacgatc
ggccggctcgtcggcagctgggatcgcagcgcgctgctcgcctgccgcgagtcggcgggc
gaggcgcagcgcgtgcgctggcgccagtaccgctccatctgggcgttcgtcgagcagcgc
aggtgccgccgcggcgcgctgctgcgccacttcggcgatcgcgcgagaccgctgaccgcg
cgcggcgtgccgtgctgcgacgtctgccggccggagatcgcgccgggcccggcggcgaga
gcgggcgggtcatcggcgcgcgacagcgtgcggcaggcgggcagctcgcgggggaccgtc
ggcctcgacgagacgatcctggagctggtcgcctccgccgagccgccggtcggccgcgcc
cgcgcggtcgagatcctgcgcggcagccgctcgaaggcgatcgacgagcattcctacgac
ggcctgcccgcctacggcacgttcgcgcacctgcgcggcgaggaggtcatgcagcgcgtc
gacatgttgaacgcgaggggcgcgctcccgcggctgaggaggagcacccgtggctag
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