Conexibacter woesei: Cwoe_1097
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Entry
Cwoe_1097 CDS
T01153
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cwo
Conexibacter woesei
Pathway
cwo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cwoe_1097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwo03019
]
Cwoe_1097
03009 Ribosome biogenesis [BR:
cwo03009
]
Cwoe_1097
Enzymes [BR:
cwo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Cwoe_1097
Messenger RNA biogenesis [BR:
cwo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cwoe_1097
Ribosome biogenesis [BR:
cwo03009
]
Prokaryotic type
rRNA helicases
Cwoe_1097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADB49529
UniProt:
D3FCQ6
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All DBs
Position
1155108..1156553
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AA seq
481 aa
AA seq
DB search
MTTFADLGLSAPVLEALRDVGYENPSPIQEQAIPPLLAGNDMIGQAQTGSGKTAAFGLPL
MEYVDPSDRDVQALVLTPTRELCIQVTQALRSYGARKGIDVVAVFGGAPIRSQQAQLRAG
GQIVVGTVGRVKDLISRHSLMLHGTRFVVLDEADEMLDLGFLEDVEKILALTPGSRQTAL
FSATMPPEIRKLSERYLYNPVHVKVRAATLTVDTVEQFSLEMSQRDKPDMLGTVLESEKP
DQAIVFVRTKIRCDQLYRTLRDRGMNVKALHGDMSQGQRDGVMLSFKSGRLPILVATDVA
ARGLDISSVTHVVNFDVPTSPDVYVHRIGRTGRVGRSGRAITFYDSKQKRDIEAIERHTR
TPMAPWTAGARVAALRVEVKPKRHESKPHDAAPTNGDRAATDGARTRLVVAGGLAQGIEP
KDLIHAITSAAGLDGESVRNIRVLEQFAFLDVPAADAARVVEQVEGTDVDGHRLRLEPVR
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgactactttcgccgatctcggcctttccgcgccggtgctcgaagcactccgcgacgtc
ggctacgagaaccccagccccatccaggagcaggccatcccgccgctgctcgccggcaac
gacatgatcggccaggcgcagaccggctctggcaagaccgcggcgttcgggctgccgctg
atggagtacgtcgatcccagcgaccgcgacgtgcaggcgctcgtgctgacgccgacgcgc
gagctgtgcatccaggtgacccaggcgctgcgctcctacggcgcgcgcaagggcatcgac
gtcgtcgccgtcttcggcggcgcaccgatccgctcccagcaggcgcagctgcgcgccggc
ggccagatcgtcgtcggcaccgtcggccgcgtgaaggacctcatctcgcgccactcgctg
atgcttcacggcacgcgcttcgtcgtgctcgacgaggccgacgagatgctcgacctcggc
ttcctcgaggacgtcgagaagatcctcgcgctgacgcccggcagccgccagaccgcgctc
ttcagcgcgacgatgccgccggagatcagaaagctctccgagcgctacctctacaacccg
gtccacgtgaaggtgagagcggcgacgctcaccgtcgacacggtcgagcagttctcgctc
gagatgtcccagcgcgacaagcccgacatgctcggcacggtgctggagtccgagaagccc
gaccaggcgatcgtcttcgtccgcacgaagatccgctgcgaccagctctaccgcacgctg
cgcgaccgcggcatgaacgtcaaggcgctgcacggcgacatgagccagggccagcgcgac
ggcgtgatgctgtcgttcaagtccggccgcctgccgatcctcgtcgcgaccgacgtcgcc
gcccgcggcctcgacatctcctcggtcacgcacgtcgtcaacttcgacgtgccgacctcg
cctgacgtctacgtccaccgcatcgggcgcaccggtcgcgtcggccgctccggccgcgcg
atcacgttctacgactcgaagcagaagcgcgacatcgaggcgatcgagcggcacacgaga
acgccgatggcgccgtggaccgccggtgcgcgcgtggcggcgctcagagtcgaggtcaag
cccaagcgccacgagtccaagccgcacgacgcggcccccaccaacggcgaccgcgccgcg
acggacggcgcgcgcacgcggctcgtcgtcgccggcggcctcgcgcaggggatcgagccg
aaggatctgatccacgcgatcacgtcggctgccggcctcgacggcgagtcggtccgcaac
atccgcgtgctggagcagttcgccttcctcgacgtccccgccgccgacgccgcgcgcgtc
gtcgagcaggtcgaaggcaccgacgtcgacggccaccgccttcggctcgagcccgtccgg
gcgtag
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