Conexibacter woesei: Cwoe_1111
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Entry
Cwoe_1111 CDS
T01153
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cwo
Conexibacter woesei
Pathway
cwo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cwoe_1111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cwo03400
]
Cwoe_1111
Enzymes [BR:
cwo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Cwoe_1111
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Cwoe_1111
DNA repair and recombination proteins [BR:
cwo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cwoe_1111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Zn_ribbon_TFIIB
zf-FPG_IleRS
DNA_ligase_ZBD
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
ADB49543
UniProt:
D3FDG9
LinkDB
All DBs
Position
1169676..1170521
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AA seq
281 aa
AA seq
DB search
MPELPEVEITARLLSEGVAGARVESTLAPGINALKTFDPPLHALDGTTLTGVSRRGKHLV
VESDAGLVLLIHLMSAGRLQLYEKRAGLRDRTSRILLRLDGDRELRLREFGTKQAAWAKL
LRAEELDAEEAVATLGPQAWPDPPPFGPLLAKARPLHTLLRDQRTIAGIGRSWVDEILWE
ARLSPFKRGRDLSEEEAERLRAATVAILGGAIAHYEEALALPLPDKLPLPLRVHRRQGEP
CPRCGAELKAVHYEDYVIAYCPVEQTDGKVLKDRRLSRLLK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtcgagatcaccgcgcgactgctgagcgagggcgtcgccggc
gcccgcgtcgagtcgacgctggcgcccggcatcaacgcgctgaagacgttcgacccgccg
ttgcacgcgctcgacggcacgacgttgaccggcgtcagccgccgcggcaagcacctcgtc
gtcgagtccgacgccgggctcgtgctgctgatccacctgatgtccgccggccggctccag
ctgtacgagaagcgcgccggcctgcgcgacagaacgtcgcggatcctgctgcggctcgac
ggcgaccgcgagctgcggctgcgcgagttcggcaccaagcaggcggcgtgggcgaagctg
ctgcgcgccgaggagctggacgctgaggaggccgtcgcgacgctcgggccgcaggcgtgg
ccggacccgccgccgttcggtccgctgctggcgaaggcgcggccgctgcacacgctcctg
cgcgaccagcgcacgatcgccgggatcggccgctcgtgggtcgacgagatcctgtgggag
gcgagactgtcgccgttcaagcgcggcagagacctcagcgaggaggaggcggagcgactg
cgtgccgcgaccgtcgcgatcctcggcggcgcgatcgcgcactacgaggaggcgttggcg
ctgccgctgcccgacaagctcccgctgccgctgagagtccaccgcagacagggcgagccg
tgcccgcgctgcggtgccgagctgaaggccgtccactacgaggactacgtgatcgcgtac
tgcccggtcgagcagaccgacggcaaggtgctcaaggaccgccgcctctcgcgcctgttg
aagtag
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