Conexibacter woesei: Cwoe_1328
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Entry
Cwoe_1328 CDS
T01153
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cwo
Conexibacter woesei
Pathway
cwo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cwoe_1328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cwo03021
]
Cwoe_1328
03400 DNA repair and recombination proteins [BR:
cwo03400
]
Cwoe_1328
Enzymes [BR:
cwo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cwoe_1328
Transcription machinery [BR:
cwo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cwoe_1328
DNA repair and recombination proteins [BR:
cwo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cwoe_1328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ADB49757
UniProt:
D3FET3
LinkDB
All DBs
Position
1402178..1406245
Genome browser
AA seq
1355 aa
AA seq
DB search
MIDINNFDAIEIGLASSKQIRSWSSGEVTKPETINYRTLKPEKDGLFCERIFGPTKDWEC
YCGKYKRVRYKGIVCERCGVEVTRSKVRRERMGHIDLAAPVSHIWFFKGVPSRIGYLLDM
APKELEKVLYFAASIVTWIDDEARERDLDSLQDEVNKVLDSYAAEKEERLLELRESLERR
VSFLESGRQSNQFNDEDEMWAEALDVNVARLSDEEREKLLRELRRTFQADMDDTEAYIED
AAERMRQVWDTFQSMKPKDVVNDETLFRELKDRFGSPFGFGEYFRGGMGAESVRDLLEQV
DLDAEREELQELVKTAKGQKQSRSVKRLKVVSAFIQSGNRPEMMILEAVPVIPPELRPMV
QLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRG
RPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVSGPSLKLHQCGLPKLMA
LELFKPFIMARLVERKAAQNIKAAKKMVDSMIPEVWDVLEEVIHEHPVLLNRAPTLHRLG
IQAFEPMLVEGKAIQVHPLVCHAFNADFDGDQMAVHLPLSAEAQAEARILMLSANNILSP
AHGAPLATPTQDMILGAYYLTYGPEADELAKVDPARAAKRPHVYRTAQEAEWSYEHGVTR
LHDLAEFRPAGRQGGHILTTVGRIIYNDKIERAIRETLGADYDPASYEFVNRSMKKRDTT
QFVDDLVQAYGAATISQVLDAFKDLGFRYATQAGITVSKNDVVIPPEKGEILGKYEGEVA
EIQDQYDMGLITEEERKDAVVDRWNAATDEVAEAMEQHFNELNPIFMMANSGARGSFKQI
RQLAGMRGLMANPKGEIIERPVKANFMEGLDVIEYFTSTHGARKGLADTALRTADSGYLT
RRLVDVAQDVIIRQEDCGAEQYVELDLYKAGGEPNDNVVGRVAALDLGPRKSVVVERGIE
MSRADFAALLEAYGEDNVKIPVRSVLKCEAPTGVCQACYGRAMATGNTAQIGDAVGIIAA
QSIGEPGTQLTMRTFHTGGVAGADITHGLPRVVELFEARKPKGLAKIAEVGGVVEIEETD
KALTVVITDDGGDEHRHTFPRRTRLHVERGDKVEPGKQLNEGSLYPHELLAIRGRTETEL
YLVKEVQEVYKSQGVDINDKHIELIVRQMLKKVRVDQKGDTDLLPGVFVDRHDYARINQV
VIDNGGEPAQAEEIILGITKASLNTDSFLSAASFQETTKVLTDAALEGKIDRLNGLKENV
IIGKLIPAATGLKRYRRIEIEPAEPLPRGMDDVGLLDHDELAAELGLTDGEALQGFGPSG
IEADLADLEEIGNGGGSHGFAEELAELDVPEDRQS
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacatcaacaacttcgacgccatcgagatcgggctcgcctcctccaagcagatc
cgctcctggagctcgggcgaggtcacgaagccggagaccatcaactaccgcacgctcaag
ccggagaaggacggcctcttctgcgagcgcatcttcggtccgacgaaggactgggagtgc
tactgcggcaagtacaagcgcgtccgctacaagggcatcgtctgcgagcgctgcggcgtc
gaggtcacccgctcgaaggtccgccgtgagcgcatgggtcacatcgacctcgccgccccg
gtcagccacatctggttcttcaagggcgtcccgagccgcatcggctacctgctcgacatg
gctccgaaggagctcgagaaggtcctctacttcgctgcgtcgatcgtcacctggatcgac
gacgaggcgcgcgagcgcgacctcgactcgctgcaggacgaggtcaacaaggtcctcgac
tcctacgcggccgagaaggaggagcgcctgctcgagctgagagagtcgctcgagcgccgc
gtctccttcctcgagagcggcagacagtcgaaccagttcaacgacgaggacgagatgtgg
gccgaggccctcgacgtcaacgtcgcgagactgtccgacgaagagcgcgagaagctgctc
agagagctgcgcagaacgttccaggccgacatggacgacaccgaggcctacatcgaggac
gcggccgagcgcatgcgtcaggtgtgggacacgttccagtcgatgaagccgaaggacgtc
gtcaacgacgagacgctcttccgcgagctgaaggaccgcttcggcagcccgttcggcttc
ggcgagtacttccgcggcggcatgggcgcggagtcggtgcgcgacctgctcgagcaggtc
gacctcgacgccgagagagaggagctgcaggagctcgtcaagacggcgaagggccagaag
cagagccgttcggtcaagcgcctgaaggtcgtctccgccttcatccagtcgggcaaccgc
ccggagatgatgatcctcgaggccgtcccggtgatcccgccggagctgcgcccgatggtc
cagctcgacggcggccgcttcgcgacgtccgacctcaacgacctctaccgccgcgtcatc
aaccgcaacaaccgcctcaagcggctgctcgacctcggcgcgccggagatcatcgtcaac
aacgagaagcggatgctccaggaggccgtcgacgcgctgttcgacaacggccgtcgcggg
cgcccggtcacgggccccggcaaccgtccgctgaagtcgctctcggacatgctcaagggc
aagcagggccgcttccgccagaacctgctcggcaagcgcgtcgactactccggccgttcg
gtgatcgtgtcgggtccgtcgctgaagctgcaccagtgcggtctgccgaagctgatggcg
ctcgagctgttcaagccgttcatcatggcccggctcgtcgagcgcaaggccgcgcagaac
atcaaggcggccaagaagatggtcgactcgatgatccccgaggtctgggacgtgctcgag
gaggtcatccacgagcacccggtgctgctcaaccgcgcgccgacgctccaccgcctcggc
atccaggcgttcgagccgatgctcgtcgagggcaaggcgatccaggtccacccgctcgtc
tgccacgcgttcaacgcggacttcgacggcgaccagatggccgtccacctgccgctctcc
gcggaggcgcaggcggaggcgcggatcctgatgctgtctgcgaacaacatcctctcgccg
gcgcacggcgccccgctcgccacgccgacgcaggacatgatcctcggcgcgtactacctc
acgtacgggccggaggcggacgagctggcgaaggtcgaccccgcgagagcggcgaagcgc
ccgcacgtgtaccgcaccgcccaggaggcggagtggtcctacgagcacggcgtcacgaga
ctccacgacctcgccgagttccgcccggcgggccgtcagggcggtcacatcctcacgacc
gtcggccgcatcatctacaacgacaagatcgagcgcgcgatccgcgagacgctcggggcc
gactacgaccccgcgtcctacgagttcgtcaaccgctcgatgaagaagcgcgacacgacg
cagttcgtcgacgacctcgtgcaggcgtacggcgcggcgacgatctcgcaggtgctcgac
gcgttcaaggacctcggcttccggtacgcgacgcaggccggcatcacggtctccaagaac
gacgtcgtgatcccgccggagaagggcgagatcctcggcaagtacgagggcgaggtcgcc
gagatccaggaccagtacgacatgggcctgatcacggaggaggagcgcaaggacgccgtc
gtcgaccgctggaacgcggcgaccgacgaggtcgccgaggcgatggagcagcacttcaat
gagctgaaccccatcttcatgatggccaactcgggtgcccgcggctccttcaagcagatc
cgccagctcgccggcatgcgcggcctcatggccaacccgaagggcgagatcatcgagcgg
cccgtgaaggcgaacttcatggagggcctcgacgtgatcgagtacttcacctcgacccac
ggcgcccgcaagggactcgccgacaccgccctccgtaccgcggactccggctacctgacg
cgccgtctggtcgacgtcgcgcaggacgtcatcatccgccaggaggactgcggcgccgag
cagtacgtcgagctggacctgtacaaggccggcggagagccgaacgacaacgtcgtcggc
cgcgtcgcggcgctcgacctcggcccgagaaagagcgtcgtcgtcgagagaggcatcgag
atgagccgcgcggacttcgcggcgctgctcgaggcctacggcgaggacaacgtcaagatc
cccgtccgctcggtgctgaagtgcgaggcgccgaccggcgtgtgccaggcctgctatggc
cgcgcgatggcgaccggcaacaccgcgcagatcggcgacgcggtcggcatcatcgccgcg
cagtcgatcggcgagccgggcacgcagctgacgatgcgtacgttccacaccggcggcgtc
gccggcgcggacatcacgcacggcctcccgcgtgtcgtggagctgttcgaggcgcgcaag
ccgaagggcctggcgaagatcgccgaggtcggcggcgtcgtcgagatcgaggagacggac
aaggcgctgacggtcgtcatcaccgacgacggcggcgacgagcaccgtcacacgttcccg
cgccgcacgcgcctgcacgtcgagcgtggcgacaaggtcgagccgggcaagcagctcaac
gaggggtcgctctacccgcacgagctgctcgcgatccgcggccgcaccgagaccgagctg
tacctcgtcaaggaggtccaggaggtctacaagtcgcagggcgtggacatcaacgacaag
cacatcgagctgatcgtgcgtcagatgctcaagaaggtgcgcgtcgaccagaagggcgac
acggacctcctcccgggcgtcttcgtcgaccgtcacgactacgccagaatcaaccaggtc
gtgatcgacaacggcggcgagccggcgcaggcggaggagatcatcctcggcatcacgaag
gcgtcgctcaacaccgactccttcctctcggcggcctccttccaggagacgacgaaggtc
ctgaccgacgcggcgctcgagggcaagatcgaccgtctcaacggtctcaaggagaacgtc
atcatcggcaagctgatcccggctgccacgggcctcaagcggtaccgtcgcatcgagatc
gagccggccgagccgctcccccgcgggatggacgacgtcggcctgctcgaccacgacgag
ctggcggccgagctgggcctcaccgacggcgaggcgctgcagggcttcggcccctcgggc
atcgaggccgacctcgccgacctcgaggagatcggcaacggcggcggctcgcacggcttc
gccgaggagctggcggagctggacgtcccggaggacagacagtcctag
DBGET
integrated database retrieval system
