Conexibacter woesei: Cwoe_3248
Help
Entry
Cwoe_3248 CDS
T01153
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cwo
Conexibacter woesei
Pathway
cwo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cwoe_3248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwo03019
]
Cwoe_3248
Messenger RNA biogenesis [BR:
cwo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cwoe_3248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_KhpA-B
P66_CC
KH_2
Oxidored_q2
CCDC-167
Motif
Other DBs
NCBI-ProteinID:
ADB51666
UniProt:
D3FE50
LinkDB
All DBs
Position
3454265..3455707
Genome browser
AA seq
480 aa
AA seq
DB search
MDIVIAAAVLAVGLVLAAVLYARRGSGQAVEANARVAADIDSALSERRAEIVRIEERILG
KEESLDAQRADLARRERSIEDRSEALDREVAAIAERRAAYEHQLERLAGVTASQAKQMLL
KDLEDDVRHESAKLVRQIEEETKRDADRRVRNILSVCMQRIAAGHATETTVSVVQLSSDD
MKGRIIGREGRNIRALENLTGVDFIIDDTPNAVVLSGFDGVRRETARITLEKLLQDGRIH
PARIEEMYYQAKSELEDHIQELGEAAVFEAHVQGLDPELVKLLGRLKFRTSYGQNVLAHS
VECANLAAMMAHELGASPKTARRAALLHDIGKAVSHEIEGPHALVGGDLARKYGEPDAVV
HAMEAHHNEVEPQTVEAVIVQAADALSGARPGARGESLEQYVRRLRELEQIATRHEGVDK
VYAMQAGREIRVMVAPAAIDDDAATLLSHAIAREIERELEFPGQIKVTVIRESRAVEYAR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgtgatcgcggcggcggtgctggcagtgggcctggtgctcgctgccgtgctg
tacgcgagacgcgggagcggtcaggcggtcgaggcgaacgcccgcgtcgccgccgacatc
gactccgcgctgagcgagcggcgtgcagagatcgtccggatcgaggagcgcatcctcggc
aaggaggagtcgctcgacgctcagcgcgccgacctcgcgcgccgcgaacggtcgatcgag
gaccgcagcgaggcgctcgaccgcgaggtcgcggccatcgccgagagacgcgccgcgtac
gagcaccagctggagcgcctcgcgggcgtcaccgcgtcgcaggcgaagcagatgctgctg
aaggacctcgaggacgacgtccgccacgagtccgccaagctcgtccgccagatcgaggag
gagaccaagcgcgacgccgaccgccgcgtgcgcaacatcctctccgtctgcatgcagcgg
atcgccgccggccacgcgaccgagacgaccgtctccgtcgtgcagctgtcctccgacgac
atgaagggccgcatcatcggccgcgagggccgcaacatccgcgcgctcgagaacctcacc
ggcgtcgacttcatcatcgacgacacgcccaacgccgtcgtcctctccggcttcgacggc
gtccgccgcgagaccgcccgcatcacgctcgagaagctgctccaggacggacggatccat
cccgcccgcatcgaggagatgtactaccaggcgaagtccgagctggaggatcacatccag
gagctgggcgaggccgccgtcttcgaggcgcacgtccagggactcgacccggagctggtg
aagctgctcggccgcctcaagttccgcaccagctacggccagaacgtgctggcccactcg
gtcgagtgcgccaacctcgccgcgatgatggcgcacgagctgggcgcctcgccgaagacg
gcgcgacgggcagctttgctgcacgacatcggcaaggccgtctcgcacgagatcgagggc
ccacacgcgctcgtcggcggcgacctcgcacgcaagtacggcgagcccgacgcggtcgtc
cacgcgatggaggcgcaccacaacgaggtcgagccgcagaccgtcgaggccgtcatcgtg
caggccgccgacgcgctctcgggcgcgcggcccggcgcgcgcggcgagtcgctggagcag
tacgtcagacgcctgcgcgagctggagcagatcgccacccggcacgagggcgtcgacaag
gtctacgcgatgcaggccggtcgcgagatccgcgtgatggtcgcgccggcggcgatcgac
gacgacgccgcgacgctgctgtcgcacgcgatcgcccgcgagatcgagagagagctggag
ttccccggacagatcaaggtcacggtgatccgcgagtcgcgggcggtcgaatacgccaga
tga
DBGET
integrated database retrieval system
