Conexibacter woesei: Cwoe_3389
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Entry
Cwoe_3389 CDS
T01153
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cwo
Conexibacter woesei
Pathway
cwo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cwoe_3389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwo03019
]
Cwoe_3389
03009 Ribosome biogenesis [BR:
cwo03009
]
Cwoe_3389
Enzymes [BR:
cwo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Cwoe_3389
Messenger RNA biogenesis [BR:
cwo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cwoe_3389
Ribosome biogenesis [BR:
cwo03009
]
Prokaryotic type
rRNA helicases
Cwoe_3389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADB51807
UniProt:
D3EZ42
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All DBs
Position
3611454..3613226
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AA seq
590 aa
AA seq
DB search
MTVSPAPSDDASDTTTFADLALRRELLDALTGLGYEEPTPIQREAIPPLLEGRDLLGQAA
TGTGKTAAFALPILQRMEPGRSAIGPLALVLVPTRELAVQVSEALHRYGRSLGARVLPIY
GGQPIGRQLNALKRGVDVVVGTPGRVLDHISRNTLRLDELRIVVLDEADEMLDMGFAEDI
ESILAETPDGGRQTVLFSATMPPRIDRIARAHLSDPVRIEIARETSAGDTPLVRQSAYVV
ARAHKPAALGRVLDVESPTAAIVFCRTRDEVDQLTETLNGRGYRAEALHGGMTQEQRDRV
MARLRNGTADLLVATDVAARGLDVEQLTHVVNYDVPSSPESYVHRIGRVGRAGREGAAIT
LAEPREHRYLKTIERVTKQRIAIEKIPTVADLHARKLEMTRAALNESLLEDGDDLARFRV
VVETLADEFDVMEVALAAVKLAHEASGGGSDDEEEIPDVQPRPFKERGGPSGRGGARGPG
GAGGGGGASGYRGRHPRGGGPSGPTTRLFVGAGRSAGIRPQDLVGAITGESQLTGREIGA
IEISDRFSLVEIPAARADEVVIALRGSTIKGRKANVRRERFERGTAPQEG
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtctcccccgcgccctccgacgacgcctccgacacgacgaccttcgccgatctc
gccctccgccgcgagctgctcgacgcgctcaccggcctcggctacgaggagccgacgccg
atccagcgcgaggcgatcccgccgctgctggaaggccgcgacctgctcggccaggcggcg
accggcaccggcaagacggcggcgttcgcgctgccgatcctgcagcggatggagcccgga
cgctcggcgatcgggccgctcgcgctcgtgctcgtgccgacgcgcgagctggcggtccag
gtctccgaggcgctccatcgctacggcaggtcgctcggcgcgcgggtgctgccgatctac
ggcggccagccgatcggccgccagctgaacgcgctcaagcgcggcgtcgacgtcgtcgtc
ggcacgcccgggcgcgtgctcgaccacatctcgcgcaacacgctgcggctcgacgagctg
agaatcgtcgtgctcgacgaggccgacgagatgctcgacatgggcttcgccgaggacatc
gagtcgatcctcgccgagacgcccgacggcggccgccagacggtcctcttctccgcgacg
atgccgccgcgcatcgaccgcatcgcgagagcgcacctgagcgacccggtgcggatcgag
atcgcgcgcgagacgagcgccggcgacacgccgctggtgcgccagagcgcctacgtcgtc
gcccgcgcgcacaagccggccgcgctcggccgcgtgctcgacgtcgagtcgccgacggcg
gcgatcgtcttctgccgcacgcgcgacgaggtcgaccagctgaccgagacgctgaacggc
cgcggctaccgcgccgaggcgctgcacggcggcatgacgcaggagcagcgcgaccgcgtg
atggcgcgcctgcgcaacggcaccgccgacctgctcgtcgcgaccgacgtcgccgcccgc
ggcctcgacgtcgagcagctgacgcacgtcgtcaactacgacgtgccgtcctcgccggag
tcgtacgtccaccgcatcgggcgcgtcgggcgcgcggggcgcgagggcgcggcgatcacg
ctcgccgagccgcgcgagcaccgctacctgaagacgatcgagcgcgtcaccaagcagcgg
atcgcgatcgagaagatcccgaccgtcgccgacctccacgcgcgcaagctggagatgacg
cgcgcggcgctgaacgagtccttgcttgaggacggcgacgacctcgcccgcttccgcgtc
gtcgtcgagacgctcgccgacgagttcgacgtgatggaggtcgcgctcgccgcggtcaag
ctcgcgcacgaggcgagcggcggcggctccgacgacgaggaggagatccccgacgtccag
ccgcgcccgttcaaggagcgcggcggtccgagcggccgcggcggcgcgcgcgggccgggc
ggcgcgggcggcggcggcggcgcgagcggctaccgcggcagacaccctcgcggcggcggg
ccgagcgggccgacgacgcggctgttcgtcggcgccggtcgcagcgccggcatccgcccg
caggatctcgtcggcgcgatcaccggcgagtcgcagctgaccggccgcgagatcggcgcg
atcgagatctcggaccgcttctcgctcgtcgagatccccgccgcgagggccgacgaggtc
gtgatcgcgctgcgcggcagcacgatcaagggccgcaaggcgaacgtccgccgcgagcgc
ttcgagcgcggcaccgcgccgcaggaggggtaa
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