Conexibacter woesei: Cwoe_3741
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Entry
Cwoe_3741 CDS
T01153
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cwo
Conexibacter woesei
Pathway
cwo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cwoe_3741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cwo03019
]
Cwoe_3741
03400 DNA repair and recombination proteins [BR:
cwo03400
]
Cwoe_3741
Enzymes [BR:
cwo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cwoe_3741
Messenger RNA biogenesis [BR:
cwo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cwoe_3741
DNA repair and recombination proteins [BR:
cwo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cwoe_3741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADB52158
UniProt:
D3F1J5
LinkDB
All DBs
Position
complement(3974422..3976539)
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AA seq
705 aa
AA seq
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MQRALSSLAAVLADPAAPGAADALAQLRARWPELAPEEREALTPLAKLAAQRVAAAAPAA
VAPVDDDLAYLDSLVAPDEDDDLGRFDSEPRSFAGPQHQQTTAPQPATAPAAPPSGALFD
MPAAPAVARTPRGEDVTPESLLGLLGLSTFRPGQREAVDAALDGRDALVVMPTGGGKSLC
YQLPALASDDLTVVVSPLIALMRDQCARLTDLGHPAVMLASGGDGEANRAALDAIRDGSA
TVCFAAPERFASPAFRSAIARRAIALFVVDEAHCVSEWGHDFRPDYLRLASVIAELGHPP
TMACTATATPKVAEEIVARLGLREPERVRSGFDRPNISFDVLPFDGEGSVARKRATLVAG
VTMDENRPAVVYCGTRRSTEEIAELLDGAGMKTVGYHAGMNAQQRSLRQDAFMRGDVDVV
VATNAFGMGVDKADVRSVWHWALPSSLEAYYQEAGRAGRDGAPARAVLLASRSDLGRLVR
FIREAEVTPGQVSGLVERLRMRAESDGAVELDAGDDRDRVALAVAERAGALTLAPGGGGR
IRATLTSGGLDRTRVAQLCRAATDRRWQSYRSIERYAATGDRCRRRQLLDHFGDPTEGAP
SGRCCDVHDSPDWLPPIRVAAKRARGSAPADDGPPVSDDALAPLKAWRRERADGKPAYTV
ANDATLREIVRRRPRTAAELLDIRGIGPSFVDKHAASLLELLGSS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgcgcgctcagctctctcgccgccgtcctcgccgaccccgccgcgcccggcgcc
gccgacgcgctcgcgcagctgcgcgcccgctggcccgagctggcgcccgaggagcgcgag
gcgctgaccccgctcgcgaagctggccgcgcagcgcgtggcggctgccgcgccggccgcg
gtcgccccggtcgacgatgacctcgcgtacctcgacagcctcgtcgcccccgacgaggac
gacgacctcggccgcttcgacagcgagccgcggtcgtttgctggtccccagcaccagcaa
acgaccgcgcctcagccggcgaccgcgccggccgctccgccgagcggcgcgctgttcgac
atgccggcggcgccggcggtggcgcgcacgccgcgcggggaggacgtgacgccggagagt
ctgctgggactgctcgggctctccacgttccggccagggcagcgcgaggcggtcgacgcc
gcgctcgacggccgcgacgcgctcgtcgtgatgccgaccggcggcggcaagagcctctgc
taccagctgcccgcgctcgccagcgacgacctgaccgtcgtcgtctcgccgctgatcgcg
ctgatgcgcgaccagtgcgcgcggctgaccgacctcggccacccggcggtgatgctcgcc
tccggcggcgacggcgaggccaaccgcgccgcgctcgacgcgatccgcgacggctccgcg
accgtctgcttcgccgcgccggagcggttcgcctcgcccgccttccgcagcgcgatcgcc
cgccgcgcgatcgcgctgttcgtcgtcgacgaggcgcactgcgtgagcgagtggggccac
gacttccgccccgactacctgcggctcgcctcggtcatcgccgagctgggccacccgccg
acgatggcgtgcacggcgaccgcgacgccgaaggtcgcggaggagatcgtcgcgcggctc
ggcctgcgcgagcccgagcgcgtccgctcaggcttcgaccggccgaacatctcgttcgac
gtgctgccgttcgacggcgagggctccgtcgcgcgcaagcgggcgacgctcgtcgccggc
gtgacgatggacgagaaccgcccggcggtcgtctactgcggcacgcgcagaagcaccgag
gagatcgccgagctgctcgacggagccgggatgaagaccgtcgggtatcacgccggcatg
aacgcccagcagcgctcgctgcgtcaggacgcgttcatgcgcggggacgtcgacgtcgtc
gtcgccacgaacgcgttcgggatgggcgtcgacaaggccgacgtgcgctcggtctggcac
tgggcgctcccctccagcctcgaggcgtactaccaggaggccggccgcgccgggcgcgac
ggggcgccggcgcgggcggtcctgctcgcctcgcgctcggacctcggccgcctcgtccgc
ttcatcagagaggccgaggtcacgcccggccaggtcagcgggctggtcgagcggctgcgg
atgcgggcggagagcgacggcgcggtcgagctggacgccggcgacgatcgcgaccgcgtc
gcgctggcggtggcggagcgcgccggcgcgctgacgctcgcgcccggtggcggcgggcgg
atccgcgcgacgctgacctccggcggcctcgaccgcacgcgcgtcgcgcagctgtgccgt
gccgcgaccgaccgccgctggcagtcctaccgctcgatcgagcgctacgccgcgaccggc
gaccgctgccgccgccggcagctgctcgaccacttcggcgacccgaccgagggcgcgccg
agcggccgctgctgcgacgtccacgacagcccggactggctcccgccgatcagagtcgcg
gccaagcgcgcccgtggaagcgcacccgccgacgacggcccgccggtctccgacgacgcg
ctcgcgccgctgaaggcgtggcgccgcgagcgcgccgacggcaaaccggcgtacacggtc
gccaacgacgcgacgctgcgcgagatcgtccgccgccggccgcgcacagcggccgagctg
ctcgacatcagaggcatcggcccgtcgttcgtcgacaagcacgccgcctcgctgctggag
ctgctcggctcctcctga
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