Conexibacter woesei: Cwoe_5400
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Entry
Cwoe_5400 CDS
T01153
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cwo
Conexibacter woesei
Brite
KEGG Orthology (KO) [BR:
cwo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cwo03016
]
Cwoe_5400
Enzymes [BR:
cwo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Cwoe_5400
Transfer RNA biogenesis [BR:
cwo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Cwoe_5400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ADB53805
UniProt:
D3EZG7
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All DBs
Position
5773855..5775045
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AA seq
396 aa
AA seq
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MPHASVPTLSGDDEIARVAELARAAGRLGIDTEFMSEGRYRALLCLVQVAVDDADAPNGV
RIALFDPFDKLDFAPLAAVLADPEIEIVLHAARQDVAIMRRAWRTDVREVFDTQVAAGFA
GYGAQTGYGNLLGAALGQRVGKTASYTRWDARPLTEEQLSYAAEDVLHLLQLSDALHDKL
SAHGRLQWAQEECRRMDEATDERDPETAYERLPRSGQLDPRARAVAREVAAWRERTAQQE
DKPVGTILPDPALVEIAKRKPSSPRELEQIRGLHGGHLRRRGQAIVEAVERGRAAEPIAR
EARRPGGEQGDAPLIALVEAVIRTRAIEAELAYELVASRADLEQIVIAARRGDPQPSVRA
LSGWRRELVGEEIAELLAGRRAVTISHGKLDVTPSV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtgccacacgcatctgttcccacgctctccggcgacgacgagatcgcccgcgtcgccgag
ctggcgagagcggccggccgcctcggcatcgacaccgagttcatgtcggagggccgctac
cgcgcgctgctctgcctcgtccaggtcgccgtcgacgacgccgacgcgccgaacggcgtc
cgcatcgcgctgttcgacccgttcgacaagctcgacttcgcgccgctcgccgcggtcctc
gccgatcctgagatcgagatcgtcctgcacgccgcgcgacaggacgtcgcgatcatgcgc
cgcgcctggagaacggacgtgcgcgaggtcttcgacacgcaggtcgcggccggcttcgcc
ggctacggcgcgcagaccggctacggcaacctgctcggcgccgcgctcggccagcgcgtc
ggcaagaccgccagctacacgcgctgggacgcgcgcccgctgaccgaggagcagctctcc
tacgccgccgaggacgtgctccacctgctgcagctgagcgacgcgctgcacgacaagctg
agcgcgcacggccgtctccagtgggctcaggaggagtgccgccggatggacgaggcgacc
gacgagcgcgaccccgagacggcgtacgagcgcctcccccgctccggccagctcgacccc
agagcccgcgccgtcgcgcgcgaggtggcggcgtggcgcgagcggacggcgcagcaggag
gacaagccggtcgggacgatcctgcccgacccggcgctcgtcgagatcgccaagcgcaag
ccgtcgagcccgcgcgagctggagcagatccgcggtctgcacggcggccacctgcgccgc
cgcggccaggcgatcgtcgaggcggtcgagcgcgggcgtgcggccgagccgatcgcgcgc
gaagcgcgccggcctggcggcgagcagggcgacgcaccgctgatcgcgctggtcgaggcg
gtcatccggacgcgcgcgatcgaggcggagctggcgtacgagctggtcgcctcgcgcgcc
gatctggagcagatcgtgatcgcggcgcggcgcggcgacccgcagccgagcgtgcgcgcg
ctgagcggctggcggcgcgagctggtcggggaggagatcgcggagctgctcgccggccgg
cgagcggtgacgatctcccacggcaagctcgacgtgacgccctccgtctga
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