Corynebacterium xerosis: FOB82_05695
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Entry
FOB82_05695 CDS
T06491
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
cxe
Corynebacterium xerosis
Brite
KEGG Orthology (KO) [BR:
cxe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cxe03019
]
FOB82_05695 (hrpB)
Enzymes [BR:
cxe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FOB82_05695 (hrpB)
Messenger RNA biogenesis [BR:
cxe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FOB82_05695 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_11
AAA_22
HA2_N
AAA_30
AAA_19
Flavi_DEAD
ResIII
Helicase_RecD
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QGS34523
UniProt:
A0A6B8TTL7
LinkDB
All DBs
Position
complement(1231318..1234047)
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AA seq
909 aa
AA seq
DB search
MLDAMTGQPSTGSPVFDVPAIGAGLPFTASAGELARALEGLVAVVQAPPGTGKTTVVPPV
VANVVAERARAEGTRPGRVIVTAPRRVAVRAAARRLAELAGVELGGAVGYTVRGDRRVSR
ETSVEFATPGVITRRLLRDGDLPGVSAVILDEVHERNLDSDILLGMLRDLRELRDDMTLV
AMSATVDAPRFAGLLASPGAPAPIVAADSVLHPLEVRWAPPTVARLDHRGVTWPFLDHVA
RQAADALRDAPGDGDVLVFVPGVREVEHVIGALERMDLASSTDSGARGVEILALHGQLRG
DEQDRVIRGGSPEGPRRIIVSTAIAESSLTVPGVRAVVDACLSRGPRLDVGRGMSGLVTT
SCARSSAEQRAGRAARLSSGLAVRCIGESEWAGLDTWPAPEIAVADLTRAMLDVAAWGTP
GAVGLPLPDAPPPRHVADAHATLAALGAIEVEPAARITDLGKVLAELPVDPRLGRALLAG
TAVLGAARAAEAVSLLDDSPRGDLTRSSGHGRSGGRGNDGGRCGNDGGGRGNRGGHRAHR
SGADASRLKRLADEHPPAVAAISRTMARLPESVPARTKADAIALVAALAWPDRIARRRSP
DSDEYLFTGGTAASAPLELRGHEWLAVTDVGRAGGRLAGRAGAVIRAAAPASRELACWAA
SSLADEVVDVGVAKPNADAKPKVTARRRELLGAIELVAHPLKPGAEQCRRAWRELFAGDA
GALRTQVGFSAEADALRRRLALLHREIGSPWPDVSDAGLTARAEELLWAVMAEPTPRPIG
VDQLRGLLPWPEAARLDELVPERLEVPSGSRIRVDYPEAGATAPPVLAAKLQECFGLADT
PALVDGRVPVQLQLLSPAGRPLAVTQDLRSFWDGPYAQVRAEMRGRYPKHPWPEDPWTAQ
ATKRTNRRK
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgccatgaccggccagccttcgacgggatcccccgtgttcgacgtccccgcc
atcggcgcgggtctgccgttcaccgcgtccgccggcgaactcgcccgggcgctcgagggc
ctggtcgcggtggtgcaggcgccgccgggcacgggcaagacgacggtggtgccgccggtg
gtggccaacgtcgtcgccgagcgcgcgcgggcggaggggacgcggccggggcgggtgatc
gtcacggcgccgcggcgggtcgcggtgcgtgcggcggcgcgtcggctggcggagttggcc
ggcgtcgagctcggcggcgcggtcgggtacacggttcgcggcgaccgcagggtttcacgg
gaaacatcggtggaattcgccactcccggcgtgatcacgcgtcgtttgcttcgcgacggc
gacctgcccggcgtttcggccgtcatcctcgacgaggtgcacgagcgcaatctcgattcc
gacatcctgctcggcatgctgcgcgacctgcgggagcttcgcgacgacatgacgctcgtg
gcaatgtccgcgaccgtggatgcgccgcgcttcgccgggctgctggcgtcgcccggcgcg
ccggcgcccatcgtcgcggcggattcggtgctgcacccgctggaggtgcgatgggcgccg
ccgacggtggcccggctggaccatcgcggcgtgacctggccgttcctggaccacgtggcc
cggcaagcggccgatgccctccgtgatgcgccgggcgacggcgacgtcctggtcttcgtc
cccggcgtgcgcgaagtcgagcacgtcatcggcgcgctggaacggatggacctcgcgtcc
tcgaccgattcgggggcgcgcggcgtcgagatcctcgccctccacggccagttgcgcggc
gatgagcaggaccgcgtcatccgcggcggctcgccggaggggccgcggcgcatcatcgtc
tccaccgccatcgcggagtcgtcgttgaccgtgccgggcgtgcgcgccgtcgtcgacgcc
tgcctgtcgcgaggtccgcggctggatgtgggccgcgggatgtcgggtctggtcacgacg
tcgtgcgcgcggtcatcggccgaacagcgcgcgggccgcgccgcccgcctcagctccggc
ctggccgtgcgctgcatcggcgaatcggagtgggcgggcctcgacacctggcccgccccg
gagatcgccgtcgccgatctgacccgcgccatgctcgacgtcgcggcgtggggcacgccc
ggcgcggtgggcctgccacttcccgacgctcccccgccccgccacgtcgccgacgcccac
gcgacgctggccgcgctcggggcgatcgaggtggagcccgccgcccgcatcaccgacctg
ggcaaggtcctcgccgagctgcccgtcgacccgcgtctgggccgcgccctgctggcggga
acggcggtgctcggtgccgcccgcgccgccgaggcggtgtcgcttctcgacgattccccc
cgcggcgacctcacccgctcctccggccatggccgcagcggcggccgcggaaatgacggt
ggccggtgcggaaacgatggtggcggccgcggcaaccgcggcggccaccgcgcccaccgt
tccggggccgacgcctcccgcctgaagcgcctggccgacgagcatcctccggccgtcgcc
gccatctcccgcaccatggcccggctgcccgagtccgtgcccgcgcgcacgaaggccgac
gcgattgcactggtggcggcgctggcatggccggaccggattgcccggcgacgctccccc
gattccgacgagtacctcttcaccggcggcaccgcggcgtcggccccgctggagctgcgc
ggccacgagtggctggccgtcaccgacgtcggccgcgccggtggccgcctcgcgggccgg
gcgggtgccgtcatccgggcagccgcaccggcgtcccgggaattggcgtgctgggcggca
tcgagtctggccgacgaggtggtggacgtgggcgtcgcaaagcccaatgccgacgcgaag
ccgaaggtcaccgcccggcgccgggaacttctcggggcgatcgagctggtcgcccacccg
ctcaagcccggcgcggagcagtgccggcgggcgtggcgcgagttgttcgcgggcgatgcg
ggggccctgcggacgcaagtcgggttcagcgcggaagcggatgctttacgacgccgcctc
gccctccttcaccgtgaaattggttctccttggccggatgtgagcgacgcgggcttgacc
gcacgggccgaggaactgctctgggccgtcatggcggaacccacgccgaggccgatcggc
gtcgatcaactgcgcgggctgctgccgtggccggaagcggcgcggctggacgaactcgtc
ccggagcgcctggaagtgcccagcggatcacgcatccgcgtcgactacccggaagccggg
gcgaccgcgccgccggtcctcgccgcgaagctgcaggagtgcttcgggctggcggacacc
ccggcgctggtcgacggccgcgtccccgtgcagctgcagctgctgtcgccggccggccgc
cctctggcggtgacgcaggacctccgcagcttctgggatggcccgtacgcgcaggtcagg
gcagagatgcggggacgctaccccaagcacccgtggcccgaggacccgtggaccgcacag
gcgacgaagcggacgaaccggcggaaatag
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