Corynebacterium xerosis: FOB82_08245
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Entry
FOB82_08245 CDS
T06491
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cxe
Corynebacterium xerosis
Pathway
cxe03420
Nucleotide excision repair
cxe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOB82_08245
03430 Mismatch repair
FOB82_08245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cxe03400
]
FOB82_08245
Enzymes [BR:
cxe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOB82_08245
DNA repair and recombination proteins [BR:
cxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOB82_08245
MMR (mismatch excision repair)
Other MMR factors
FOB82_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
QGS34950
UniProt:
A0A6B8TU31
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All DBs
Position
1793727..1797062
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AA seq
1111 aa
AA seq
DB search
MSIDQGTIAPGTIDPVTLSRMIGQPHQPTPAQAEVIGAPPEPLLVVAGAGAGKTETMAAR
VVWLVANGFVRPEEVLGLTFTRKAARELGQRIRERLTALAASRPFDQVAAPEVREALRVI
APEVSTYDAYAGSLVRDYGLLLPAEPGADVLDGATQWQMAWELVRDRGDIATELSVPALV
DKLMTLSEEIDSNLASVDDVREQTEAFIHNILQSPKAPRQRKDLHSKLEGPLRAQRDRLQ
LIPLVRELRERHEAESSVTFGRQMAMAARLADGIAEVGEAERRRFRVVMLDEYQDTSHAQ
RVLLRALFAGTAVTAVGDPMQAIYEWRGATAANLTRFVTDFPRPDGRSAEKKQLLTSWRS
PSSVLELANDVSDRAFGEAPRTVEELTPRAGAGRGIVRLALHGTVDDELAWVAGHMAEEF
RAAREAGRPITAAVLVRKNKHSAAILDALTEAGVPAEIVGLAGLLTLPEILDVIACLRVL
ADPADDRAMLRILTWPRAPLGAADIAALGRRARQLASYARERPGDAEPADGPLSALDADL
AALARERATPPTGLGHAVADPAVRDEGTAAPGYSDEGKRRIAELSATLRNLRRFSLRKPL
PELIADIEEAFGIRVEVAAGGAGIGPGTVHLDKFTEVAADFSRRVGAELGAFLGYLERAA
AHDKGLEPGKTRMRGDRVEIMTVHKAKGLEWNVVAVPHVCASVYDEVTVDTWLTKAELLP
SDVMSDGESGDGAPVLDTAVADHQGDLVKALDEHKLDYRAAKIAEADRLFYVAVTRAEDS
LLVSGSQRMTPGRKKPDGPSEHLLALRKLRPDAVETWVEEVSAEPLPIPDAEGVHWPAAP
VPERREALERGADLVRRALADPEPAAAPIDGDVSRIWEDEVSILLEERRRAAAEAVSVPM
PVQLSTSEYQALRADPAAFARRRARPLPYKPNRFARRGTAFHAWLENRFGAAVLLDDDDL
FAAIDGQGEGQDVAVEKLKEKFAASRWADRTPEFVEEPFDIGVGGRRIVGRIDAVFRIDG
RWMVVDWKTGRRPVGDKARQAALQLAVYRIAWADRRRAAGEDVSPEDVRAAFHYIADDVT
VEPEGRDLPDRLELDEAMRELVADTTTRKGS
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaccaggggaccatcgccccggggaccatcgatccggtgaccctgtcccgc
atgatcgggcagccccaccagccgacgccggctcaggccgaggtcatcggcgcgccgccg
gaaccgctgctcgtcgtcgccggtgccggcgcgggcaagaccgagaccatggccgcccgc
gtcgtgtggctggtggcgaacggtttcgtgcgtcccgaagaggtcctgggccttacgttc
acgcgcaaggcggcccgcgaactggggcagcgcattcgcgaacggctcacggcactcgcc
gccagcaggccgttcgaccaagtggcggcgccggaggtgcgcgaagcactgcgggtgatc
gcccccgaagtgtccacgtacgacgcctacgccgggtccctcgtccgcgattacggcctg
ctgttgcccgccgaacccggcgccgacgtcctcgacggggcgacgcagtggcagatggcg
tgggagctggtgcgcgaccgcggggacatcgcgaccgagttgagcgttcccgcgctggtg
gacaaattgatgacgctgtcggaggagatcgattccaacctggcgtcggtcgacgacgtg
cgcgagcagaccgaggctttcatccacaacatcctgcagtcgccgaaggctccgcggcag
aggaaggacctgcactcgaagctcgaggggccgttgcgggcgcagcgcgaccggctgcag
ctcattccgctggtccgcgagcttcgggagcggcacgaggcggagtcctcggtgacgttc
gggcggcagatggccatggcggcccggctcgccgacggcatcgcggaggtcggggaggcg
gagcggaggcgattccgcgtggtcatgctcgacgagtaccaggacacctcgcatgcccaa
cgggtgctgctgcgggcgcttttcgccggcaccgccgtcactgccgtgggcgatcccatg
caggcgatctacgaatggcgcggcgcgacggccgcgaacctgacgcggttcgtcaccgat
ttcccccggcccgacggccggtcggccgagaagaagcagctgttgacgtcgtggcgcagt
ccgtcgtcggtgctggagctggccaacgacgtctccgaccgggccttcggcgaagcgccg
cgcaccgtggaggagctgacgccccgggccggggccggccgggggatcgtgcggttggcc
ctgcacggcaccgtcgacgatgagttggcgtgggtcgccggtcacatggccgaagagttc
cgggcggcccgcgaagccgggcggccgatcacggctgcggtgctggtgcgcaagaacaag
cactcggccgcgatcctcgacgccctgacggaggccggcgtgcccgccgagatcgtgggt
ctggcgggattgctcacgctgccggagatcctcgacgtcatcgcctgcctgcgggtgttg
gccgacccggccgacgatcgggccatgctgcgcattctcacgtggccccgcgcaccgctg
ggcgcggcggacatcgcggcgttgggcaggcgcgcccgccagctggcgtcctacgcgcgc
gagcgcccgggtgacgcggaacccgcagacgggccgctgtccgcccttgacgcggacctg
gcggccctggcgcgcgagcgcgccacgccgccgaccggtttgggccatgccgtcgcggac
cccgcggtgcgcgacgagggcacggccgccccggggtactccgacgagggcaaacgccgc
atcgccgaactctcggcgacgctgcgcaatctgcggcggttctcgctgcgcaagccgttg
ccggagctcatcgcggacatcgaggaggcgttcggcatccgcgtggaggtcgccgccggc
ggtgcgggcatcggcccgggcaccgtgcacctggacaagttcaccgaggtagcggcggat
ttttcccggcgcgtcggcgcggagctgggtgctttcctgggctatctcgagcgcgcggcc
gcccacgacaagggcctggaaccgggcaagacccggatgcggggcgaccgcgtggagatc
atgacggtccacaaggccaaaggcttggagtggaacgtcgtggcggtcccgcacgtctgc
gcgtcggtctacgacgaggtcacggtggacacctggctgaccaaggcggagctgctgccg
tccgacgtcatgtccgacggcgaatccggcgacggcgcccccgtcctggacaccgcggtg
gccgatcaccagggcgacctggtcaaggcgctcgacgagcacaagctggactaccgcgcc
gcgaagatcgccgaagccgaccgcttgttctacgtggcggtcacccgcgcggaggactcc
ctgctggtctcgggcagccagcggatgacccccggccgcaaaaagcccgatggcccgtcg
gagcatctcctggcccttcggaaactgcggcccgatgcggtggagacgtgggtggaggag
gtctccgcggagccgctgcccatccccgacgcggaaggcgtgcactggccggccgcgccg
gtcccggaacgccgcgaagccctggaaaggggcgcggacctggtgcgccgggccctcgcc
gacccggagccggcggccgcccccatcgacggcgacgtgtcccggatctgggaagacgaa
gtgtccatattgctggaggaacgtcgccgggcggccgccgaggcggtgtcggtgccgatg
ccggtgcagttgtccaccagcgaataccaggcgctgcgggcggacccggcggcgttcgcc
cgccggcgcgcgcgcccgttgccgtacaagcccaatcgtttcgcccgccgtggcacggcc
ttccacgcgtggctggagaacaggttcggggcggcggttctgctcgacgacgacgacctg
tttgccgcaatcgacgggcagggcgagggccaggacgtggccgtcgaaaagctgaaggag
aagttcgcggcgagccggtgggccgacaggaccccggaattcgtcgaggagcctttcgac
atcggcgtcggcggccggcgcatcgtcgggcgcatcgacgcggtgttccgcatcgacggg
cggtggatggtcgtggactggaaaacggggcgccggccggtcggggacaaggcccggcag
gcggcgctgcagctggccgtgtatcgcatcgcctgggccgaccgcagacgcgcggcgggc
gaggacgtgtccccggaagacgtgcgcgcggcgttccactacatcgccgacgacgtcacc
gtagaaccggaggggcgcgacctccccgaccggctagagttggacgaggcgatgcgcgag
ctcgtcgccgacacgacgacgaggaaaggtagctga
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