Corynebacterium xerosis: FOB82_08800
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Entry
FOB82_08800 CDS
T06491
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cxe
Corynebacterium xerosis
Pathway
cxe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cxe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOB82_08800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cxe03019
]
FOB82_08800
03400 DNA repair and recombination proteins [BR:
cxe03400
]
FOB82_08800
Enzymes [BR:
cxe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOB82_08800
Messenger RNA biogenesis [BR:
cxe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FOB82_08800
DNA repair and recombination proteins [BR:
cxe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FOB82_08800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QGS35899
UniProt:
A0A6B8TM09
LinkDB
All DBs
Position
complement(1912482..1914827)
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AA seq
781 aa
AA seq
DB search
MPESPSTDGALGPATRAEADELLQGLAGPGTSLRDDQWTAIDALVNRRERLLVVQRTGWG
KSAVYFIAAKLLRRRGRGASVIISPLLALMRNQVAAARRAGIRAETVNSANMTEWDDIQR
RVAGGEVDVLLVSPERLNNPQFRDDVLPSLARAAGMVVVDEAHCISDWGHDFRPDYRRIR
DLLAGLGAGVPVLATTATANDRVVEDVRSQLGDGTGVLRGGLDRESLRLNVVRLRDTAKR
PAWLASHLRELPGSGIIYCLTVAAAEDLAEALTAAGDEVAAYTGRTDAAERERLEAALLD
NEVKALVATSALGMGFDKPDLGFVVHMGAPGSPISYYQQIGRAGRGTDRAEVVLLPGAED
RDIWEYFASLSFPAEDVVRSLLAELETYGDQPASTARLETAVDLSRSRLDQVLKVLDVDG
AVRRVRGGWVATGAPWEYDAARYGGLAEARKAEQNAMIAYERLGDGTAAGGAGGGPGDGA
AAGGAGASSSNRSPDPDACRMLFLRRQLDDPTATGPCGRCDNCTGRHLSPDVDASVDDVV
RARLTEPGVRIPARKQWPTGLDRLMAGGDGHGRAGATLGATGLRVPLKGRIHGIGEGRAL
GRLNDIARGPALTQLLADASWRPDASRWKQDRTLRNVVEVLAGWDWDVRPDTVVALVTHD
VVDASAGAALEAGSPAHGSALDEMVVACAIAVSDIGRMAFGGVLPVRDGSRPVDAQNSAY
RVAGLADRWDWAAIGGIELGDGPILLVTDCIDTGWSITLAAAALASATGRDVLPLALAAR
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaatctccctcgaccgacggggccctcgggcccgcgacgcgcgcggaggccgat
gagctgttgcaggggctcgccgggccggggacgtcgctgcgcgacgaccagtggacggcg
atcgacgcgctggtcaaccggcgcgagcggctgctggtggtgcagcgcaccggctggggc
aagtcggcggtgtacttcatcgcggcgaagctgctgcgcaggcgcggacgcggggccagc
gtgatcatttctccgctgctggcgctgatgcgcaaccaggtggcggcggcgcggcgggcg
ggcatccgggcggagaccgtcaacagcgccaacatgacggaatgggacgacatccagcgg
cgcgtcgccggcggcgaggtcgatgtgctgctggtgtcgcccgagcgcctgaacaacccg
cagttccgcgacgacgtgctgccgtcgctggcgcgggcggcgggcatggtcgtcgtcgac
gaggcccactgcatttccgactgggggcatgacttccgcccggactaccggcgcatccgt
gatctgctggccgggctcggggcgggcgtgccggtgctggcgacgacggcgacggccaac
gaccgcgtggtcgaggacgtgcgctcccagctcggcgacggcaccggggtgctgcgcggc
ggcctggaccgcgaatcgctgcggctcaacgtggtgcggttgcgggatacggcgaagcga
ccggcgtggctggcgtcgcatctgcgggagctgccggggtcgggcatcatctactgcctg
acggtggcggccgcggaggatctggcggaggcgctgaccgcagcaggcgacgaggtcgcc
gcgtacaccgggcgcaccgacgccgccgaacgtgagcggctggaggcggcgctgctggac
aacgaggtcaaggcgctggtggccacgtcggcgctggggatgggcttcgacaagcccgac
ctggggttcgtggtgcacatgggcgcgccggggtcgccgatctcgtattaccagcagatc
ggccgtgccggccgcggcaccgaccgggcggaggtcgtgttgttgccgggtgcggaggac
cgcgacatctgggagtacttcgcctcgttgtccttccccgcggaggacgttgtgcggtct
ctgctcgcggagctggagacctacggtgaccagcccgcctccaccgcccggttggagacg
gcggtggatctgtcgcggtcccggttggatcaggtgctcaaggtcctcgacgtcgatggc
gccgtgcgtcgcgtgcggggcggctgggtcgccaccggcgcgccgtgggagtacgacgcc
gcccgctacggcggtctggccgaggcacgcaaggccgaacagaacgcgatgatcgcctac
gagcggctcggcgacggcacggctgccggcggtgcgggcggcgggcccggagatggcgcg
gctgcgggaggtgcgggggcgtcgtcaagcaaccgctcccccgaccccgacgcgtgccgc
atgctgttcctgcgccgccagctcgacgacccgacggcgactggcccgtgcgggcgctgc
gacaactgcaccggtcgccacctgtcccccgacgtcgacgcgagcgtcgatgacgtggtg
cgggcgcggctgaccgaacccggcgtgcgcatccccgcccgcaagcaatggccgacgggg
ctggaccgcctcatggccggtggcgacgggcacgggcgcgccggggcgacgctcggggcg
actggcctgcgggtgccgctgaagggcaggatccacggcatcggcgaaggccgcgccctg
ggccgtctcaacgacatcgcccgcggcccggcgctgacgcagctgctcgccgacgcgtcg
tggcgccccgacgcctcccgatggaagcaggaccggacgctgcgcaacgtggtcgaggtg
ctcgccggctgggactgggacgtgcggcccgacaccgtggtggcgttggtgacgcatgac
gtcgtcgatgcttcggcgggcgcagctctcgaagccgggtccccggcgcatggttcggca
ctcgacgagatggtcgtcgcctgcgccatcgccgtgtccgacatcgggcgcatggccttc
ggcggcgtgctcccggttcgcgacgggtcccgcccggtcgacgcacagaactccgcctac
cgggtggcggggctcgccgaccggtgggattgggcggcgatcgggggcatcgagctcggc
gacggaccgatcctgttggtcaccgactgcatcgacaccggctggtcgatcacgctggcc
gccgccgcgctggcttcggccaccggccgcgacgtcctgcccctggcgttggccgcccgc
ggttag
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