Corynebacterium xerosis: FOB82_09575
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Entry
FOB82_09575 CDS
T06491
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cxe
Corynebacterium xerosis
Pathway
cxe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cxe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOB82_09575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cxe03019
]
FOB82_09575
03009 Ribosome biogenesis [BR:
cxe03009
]
FOB82_09575
Enzymes [BR:
cxe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOB82_09575
Messenger RNA biogenesis [BR:
cxe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FOB82_09575
Ribosome biogenesis [BR:
cxe03009
]
Prokaryotic type
rRNA helicases
FOB82_09575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
Cas3-like_C_2
DEDD_Tnp_IS110
CMS1
adh_short
HEM4
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGS35921
UniProt:
A0A6B8TTK7
LinkDB
All DBs
Position
2085183..2087309
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AA seq
708 aa
AA seq
DB search
MKVDESEVSNADEAPFEDNAAPVEKAEQKNDKKKADKADKADNDEPQGPGFDELDLPDEV
VAAVTKVGYESPSPIQAATIPTLMSGRDVVGLAQTGTGKTAAFALPVLARIDRKVRAPQA
LVLAPTRELALQVADSFQSFADHLGGISVLPIYGGQSYGIQLSGLRRGAQVIVGTPGRVI
DHLQKGSLDISDLRFLVLDEADEMLNMGFQEDVERILADTPAEKQVALFSATMPAAIRRL
SKQYLNDPQEITVKSQTRTADNIRQRFLMTAHRNKLDALTRVLEVEEFEAMIVFVRTKHE
TEELAEKLRARGFTAAAINGDIAQNQRERTIDQLKNGRLDILVATDVAARGLDVDRISHV
VNFDIPHDTESYVHRIGRTGRAGRSGEALLFVTPREGRLLRSIERATKSTLHEMTPPSVD
EVNDSRKSKFMDAITEALADDQVPVFRELIQSYADEHDTPLADIAAALAASSQNGDFLMK
EPPRRKRDDRDGRGRDSREGRGRFEEDRGGRGVRDRRSDHAARKAERAEFTRDGMSKFRI
SVGRRQHVRPGAIVGAIANEGGLTSKDFGHIDIRGDHTLVELPANMPQQVFENLKDTRIS
GQLIHITPDDGTNVDDGSHAYDDRDDRRGGGRGGRGGFRGGRGGDDRGGRGGYRGGRGRD
DDDRGGRGGRGGYRGGRDDERGGRGGYRGGRGGDERGGRGGYRGGRDY
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtcgacgagtccgaggtttccaacgccgacgaggcccccttcgaggacaacgcc
gccccggtcgagaaggccgagcagaagaacgacaagaagaaggccgacaaggccgacaag
gccgacaatgacgagccccagggccccggcttcgacgagctggacctgcccgacgaggtc
gtcgccgcggtgacgaaggtcggctacgagtcgccgtcgccgatccaggccgcgaccatc
ccgacgctgatgagcggccgcgacgtcgtcggcctggcgcagaccggcaccggcaagacc
gccgccttcgcgctgccggtcctcgcccgcatcgaccgcaaggtccgcgccccccaggcg
ctcgtgctcgccccgacccgcgagctggcgctccaggtcgccgactccttccagtccttt
gccgaccacctcggcggcatctccgtgctgccgatctacggcggccagtcctacggcatc
cagctgtccggcctgcgccgcggcgcccaggtcatcgtgggcaccccgggccgcgtcatc
gaccacctgcagaagggctcgctggacatctccgacctgcgcttcctggtcctcgacgaa
gccgacgagatgctgaacatgggcttccaggaagacgtcgagcgcatcctcgccgacacc
cccgccgagaagcaggtcgccctgttctcggcgaccatgccggccgcgatccgccgcctg
tcgaagcagtacctcaatgacccgcaggaaatcaccgtcaagtcgcagacgcgcaccgcg
gacaacatccgccagcgtttcctcatgaccgcgcaccgcaacaagctcgacgccctgacc
cgcgtgctggaggtcgaggagttcgaggcgatgatcgtgttcgtgcgcaccaagcacgag
accgaggagctcgccgaaaagctgcgcgcccgcggcttcaccgcggccgccatcaacggc
gacatcgcgcagaaccagcgcgagcgcaccatcgaccagctgaagaacggccgcctggac
atcctcgtggccaccgacgtcgccgcccgcggcctggacgtcgaccgcatcagccacgtg
gtcaacttcgacatcccccacgacaccgagtcctacgtccaccgcattggccgcaccggc
cgggcaggccgctcgggcgaggcgctgctgttcgtgaccccgcgcgagggccgcctgctg
cgctccatcgagcgcgcgacgaagtcgaccctgcacgagatgacgccgccgagcgtcgac
gaggtcaacgactcccgcaagtcgaagttcatggacgccatcaccgaggcgctcgccgac
gaccaggtcccggtcttccgcgagctgattcagtcctacgccgacgagcacgacaccccg
ctggccgacatcgccgccgcgctggccgcgtcgtcgcagaacggcgacttcctgatgaag
gagccgccgcgccgcaagcgcgacgatcgcgacggccgcggccgtgacagccgcgagggc
cgtggccgcttcgaggaggaccgcggtggccgcggcgtccgcgatcgccgcagcgatcac
gccgcccgcaaggccgagcgcgccgagttcacccgcgacggcatgagcaagttccgcatc
agcgtcggccgccgccagcacgtgcgccccggcgcgatcgtcggcgccatcgccaacgag
ggcggcctgacgtcgaaggacttcggccacatcgacatccgcggcgaccacaccctggtt
gagctgccggcgaacatgccgcagcaggtgttcgagaacctcaaggacacccgcatttcg
ggccagctgatccacatcacgcccgacgacggcaccaacgtcgacgacggttcccacgcc
tacgacgaccgcgatgaccgtcgcggcggcgggcgcggcggccgcggtggtttccgtggc
ggtcgcggcggcgatgatcgtggcggtcgcggcggttaccgcggtggccgtgggcgcgac
gacgacgatcgcggtggccgcggtggtcgcggcggttaccgcggtggtcgcgacgacgag
cgcggcggtcgcggtggctaccgtggcggtcgcggcggcgacgagcgtggtggccgtggc
ggttaccgcggtggacgcgactactag
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