Cyclobacterium xiamenense: ABWH99_02195
Help
Entry
ABWH99_02195 CDS
T10772
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cxi Cyclobacterium xiamenense
Pathway
cxi00300
Lysine biosynthesis
cxi00470
D-Amino acid metabolism
cxi01100
Metabolic pathways
cxi01110
Biosynthesis of secondary metabolites
cxi01120
Microbial metabolism in diverse environments
cxi01230
Biosynthesis of amino acids
Module
cxi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cxi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABWH99_02195 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABWH99_02195 (dapF)
Enzymes [BR:
cxi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ABWH99_02195 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
XHC46334
LinkDB
All DBs
Position
520763..521548
Genome browser
AA seq
261 aa
AA seq
DB search
MDITFYKYQGTGNDFIMVDGRAFSLGANPIPRIQALCRRRFGIGSDGLILLQNKSGYDFE
MLYFNADGTQSMCGNGARCAVAFAKFLGIITDVTHFLAIDGPHRAKISGDWVALEMGPVQ
EIFPAGEDFFVDTGSPHHVRLVSNLDQYDVVGTGKAIRNDLATYPRGTNVNFMKPLSDNE
IQVRTFERGVEDETLSCGTGVTACALVYGAQRNQQSIKISTLGGQLEVRFVKNPDGGFEQ
IVLAGPAKQVFSGKISLPEAT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggatataaccttttacaaatatcagggaacaggaaacgatttcattatggtggacggg
cgcgcattttccctgggtgcgaatccgattccccgaatccaggcgctttgtcgcagaaga
ttcggaattggttccgacggtttgattctcttgcagaacaaatccggttacgatttcgaa
atgctctattttaacgcagatggcacgcagagcatgtgtggaaacggggcacgttgtgcg
gtagcttttgctaaatttttgggaatcatcacagatgtcacccacttcctggctattgac
ggaccccatcgggcaaaaatttcaggagactgggtagcgttggagatgggccctgtacag
gagatttttccggcaggagaggactttttcgtagatacgggatcccctcatcacgtacgg
ctggtgagcaatttggaccaatacgatgtagtaggaacgggaaaagcaattcgaaacgac
cttgctacctatccccggggcaccaatgtgaatttcatgaaacccttatccgataacgaa
atacaagtacgaacattcgagcggggagttgaggacgagaccctttcctgcggtacggga
gtcaccgcctgtgcgctggtttacggcgcacaacgcaaccaacaatcaataaaaatcagc
accttgggtggacagctggaagtacgttttgtaaaaaaccccgatgggggttttgagcag
attgttttggcgggacccgccaaacaagtgttttccggcaagatttccctgcccgaagca
acctaa
DBGET
integrated database retrieval system