Cyclobacterium xiamenense: ABWH99_03790
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Entry
ABWH99_03790 CDS
T10772
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cxi Cyclobacterium xiamenense
Pathway
cxi03030
DNA replication
cxi03430
Mismatch repair
cxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWH99_03790 (dnaE)
03430 Mismatch repair
ABWH99_03790 (dnaE)
03440 Homologous recombination
ABWH99_03790 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cxi03032
]
ABWH99_03790 (dnaE)
03400 DNA repair and recombination proteins [BR:
cxi03400
]
ABWH99_03790 (dnaE)
Enzymes [BR:
cxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWH99_03790 (dnaE)
DNA replication proteins [BR:
cxi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABWH99_03790 (dnaE)
DNA repair and recombination proteins [BR:
cxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABWH99_03790 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
MG4
Etd1
T2SSK
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
XHC46635
LinkDB
All DBs
Position
complement(887584..891870)
Genome browser
AA seq
1428 aa
AA seq
DB search
MYLVFDTETTGLPRNYNAPMSDLDNWPRLVQLAWQLHDERGHLLSQHNFIVRPEGFTIPY
NAEKIHGISTERALKEGHELNQVLQEFETDLNRCQYLVGHNIGFDINVVGAELLRNSRQA
AALKKENLDTKDIGTDFCALPGGKGGKYKWPTLLELHTKLFGTGFGDAHDAAYDVDATAK
CFFGLIKEGVLPPADGVALPEVQYEAPDLEEANFAAAKDSSKTAAKDVLKAADGADISDL
EAVPFSHLHVHTQFSILQATSEIPVAVRRARELGMPALAMTDHGNMMGAFHFVREAFNQG
IKPIIGCEFNLCRDRKNKSNKDDGFQTVLLAKNKNGYHNLAKLASYANIEGFYYVPRIDR
ELLVQYKGDIIASTGGLWGEIPYLILNVGETQAEEAFVWWLEQFGEDFYIELNRHGIPEE
EKVNEVLLQWAAKYQVKYFAANNSYYNTKTDAKAHDILLCVKDGELVAKPKKYIGKRGRE
FRYGFPNEEFYLKSPEEMKKLFADLPEAIACTNEIVEKIDPFKLAREVLLPKFDIPEEFI
DPQDEVDGGNRGENAFLRHLTYEGAKKRYPTLTEEIRERLDFELETIERTGYPGYFLIVQ
DFTRAARDMGVSVGPGRGSAAGSAVAYCVGITNVDPIAYDLLFERFLNPDRVSLPDIDID
FDDEGRQRVIEYVIEKYGANQVAQIITYGTMAAKSAIRDTARVLDLPLSEADRLAKLVPD
IKLKSLFELANDRPRLSAKLKNDNENLDKALELIRISKGNDDNAKTVNQAMVLEGSVRNT
GIHACGVIITPDDITNFVPVALAKDSDMVCTQFDNSVVESAGLLKMDFLGLKTLTLIKDA
VRIIQERHGILLDPENFPIDDEKTYELFQRGETVGIFQYESAGMQKYMRELKPTVFADLI
AMNALYRPGPLEYIPSFIKRKHGVEPIAYDLEDMEEYLEETYGITVYQEQVMLLSQKLAG
FTKGEADVLRKAMGKKQKDVLDKMKPKFIDQAAAKGHDSKKLEKIWKDWEAFASYAFNKS
HSTCYAWIAYQTAYLKAHYPAEYMASVLSNNMNDITQVTFFMEECKRMGIQVLGPDVNES
KSDFTVNMEGQVRFGMAAIKGAGNAAVNAIIEEREAAGTYKNIFDFTKRVNLRAVNKKTM
EVLAMAGGFDCFSEFHRRQYLEAPEGESSLLEKAVKYAQKVIQEEESSQVSLFGGSNGTD
IPLPSVPSLEPFSQLQQLNIEKEVVGLYISGHPLDQFKVEIEAFTNAGLPELADLAQLKT
RGEIKLAGAVTSFAHRTTKNGKPFGTLSLEDYQGGHTFFLFGEDYVKFKQYFMTGWFLYI
SGSVHPNKYKPGEFEFKINQIVLLNEIRGRMIKGVRVHIDLDDLSLDLMEKLESITQKYQ
GEAKLYINIIDNKENITLDLMSSKYRIDPSNELIQALEQLPEVAYKII
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtacttagtatttgataccgaaaccaccggattacccagaaactacaatgcccccatg
tccgacctggacaactggccgcgtttggtacagttggcctggcaacttcacgacgaacgg
ggccacttgctttcccagcacaatttcatcgtcagacccgaggggtttaccattccgtat
aacgccgagaaaattcacggtatttctacggaacgagcactaaaggaagggcatgaactc
aatcaggtcttgcaagaatttgaaaccgacctgaaccgctgccaatacctggttggtcac
aacattgggtttgacatcaacgtggtcggggccgaactgctgcgcaacagccggcaggct
gccgcattgaagaaagaaaacctggacaccaaagatattggtacggatttttgtgccttg
cccgggggcaagggcggcaagtacaaatggcccacattgctagaactacataccaaatta
tttggaaccggttttggcgatgctcacgatgctgcctatgacgtggatgccacggcaaaa
tgtttttttggcttgataaaagaaggagtactgccaccggcggatggagtagccctaccc
gaagtacagtacgaagcgcccgatctggaagaagcgaattttgcagcggcgaaagacagc
agtaaaaccgctgccaaagacgtattaaaagcagcagacggggcagacatttcggacctg
gaggcagttccattcagtcatttgcatgtgcatactcagttttccattttgcaggcaact
tcggagattccagtcgccgtaagacgggctcgggaattgggcatgcccgcgctggcgatg
accgatcacggaaacatgatgggtgcctttcattttgtccgggaagcatttaatcagggg
atcaagcccatcattggctgtgaatttaacctgtgcagagaccggaaaaacaagtccaac
aaggacgatggctttcagaccgtgttgctggcaaaaaataaaaatggctaccataacctg
gcgaaattggcctcttacgcaaacattgagggtttttattatgtaccccgtatagatcgg
gagttgctcgtgcagtacaaaggcgacatcattgccagtaccgggggcctctggggagaa
attccgtaccttattctaaatgtaggagaaacacaggcggaggaagcatttgtctggtgg
ctggaacagtttggagaagatttttacatcgaactcaaccggcatggcattcccgaggaa
gaaaaagtaaacgaagtcttgcttcaatgggccgcaaaataccaggtcaagtatttcgca
gcgaataattcctattacaatacgaaaaccgatgcaaaggcccatgatatcctgctctgc
gtgaaggacggagagttggtcgcaaaaccaaaaaaatacattggaaaaagggggagggaa
ttccggtatggatttcccaacgaggaattttacctcaagagcccggaagaaatgaaaaaa
ctctttgcagaccttcccgaagccatcgcttgtaccaacgagatcgtcgaaaaaatcgac
cccttcaaactggcccgtgaagtcttgcttccgaagttcgatattccggaagagttcatt
gatccgcaggatgaagtggacggaggaaaccgtggcgaaaacgcattcttgaggcacctg
acctacgaaggagctaaaaaacgctatcctacgcttaccgaagaaataagggagcgtctg
gattttgaactggagaccatcgagcgtacgggataccccggatattttcttattgtacag
gattttacgcgagctgccagagatatgggcgtatccgttggtcccggtaggggatcggcg
gctggatcggcggtagcctattgcgtgggaatcaccaatgtagaccccattgcttatgat
cttctatttgagagattcctgaatccggatcgggtctcgcttccggatatcgacattgac
tttgacgacgaagggcgccagcgtgtcatcgagtatgtaatcgaaaaatacggtgccaac
caggtggctcaaatcatcacttacggaaccatggctgccaaatccgcaatacgggataca
gcccgggtactcgaccttcccctctcggaggccgaccggctcgccaagctggtaccggat
atcaaacttaaaagtctttttgaactggccaacgatcgtccgaggctttccgcaaagttg
aaaaacgacaacgaaaacctggacaaagcgttggaactgattcggatttcaaagggaaac
gacgacaatgccaaaacagtaaatcaggcaatggtgctggaaggatccgtgcgtaacacc
ggaattcatgcctgtggcgtgatcatcaccccggatgacatcaccaattttgtgcccgtg
gcactggcaaaggattccgacatggtttgtacgcaatttgacaattccgtcgtagaaagt
gccggtcttttgaaaatggattttttggggttaaaaacccttactcttatcaaagatgcg
gtacgtatcatccaggaacggcacggtatcttgctggatcccgaaaactttccaatcgat
gacgaaaaaacctacgaactatttcaacgtggagaaaccgtgggcatctttcaatacgaa
tccgctggcatgcaaaagtacatgcgcgaactcaaacctaccgtttttgcagatctgatc
gccatgaatgccctctaccggcccggacccttggagtatatccccagttttatcaagcga
aaacacggggtggaacccatcgcctacgatctggaggacatggaggagtacctggaggaa
acctatggcattaccgtctatcaggagcaggtcatgcttctttcccaaaaacttgccgga
tttaccaaaggtgaagccgacgtacttcggaaagcaatgggtaagaaacaaaaggatgtg
ctggataaaatgaagcccaaattcattgatcaggcagcagccaaaggacacgactccaaa
aagctggagaaaatatggaaagactgggaagcctttgcctcctatgcgtttaacaaatcc
cactctacctgctacgcctggatcgcctaccaaaccgcgtacctgaaagcccattacccc
gccgaatacatggcttcggtactgagtaataacatgaatgacatcacccaagtgacgttt
ttcatggaggagtgcaagcgaatgggcatccaggtgttgggcccggatgtcaacgaatcc
aaaagcgactttaccgtaaacatggagggacaggtgcgctttggaatggccgcgatcaaa
ggggcgggcaacgcggcagtaaatgccatcatcgaagaacgagaagccgccggcacctac
aaaaatatctttgattttacaaaacgggtaaacctacgggcagtcaataaaaaaaccatg
gaggtattggctatggctggaggctttgattgtttttcagaatttcaccgaaggcaatac
ctggaagcgccggagggtgaatccagcctattggaaaaggccgtaaaatacgcacaaaaa
gtcattcaggaagaggaaagttctcaggtatccttgtttggaggaagcaacggtaccgac
ataccacttccttccgttccgagcctggagccattcagtcaactacagcaactcaacatt
gaaaaagaggtagtggggctgtacatttcgggacatccgctcgaccagtttaaagtagaa
atcgaagcctttacgaacgccggtctgccggagttagccgatcttgcacagctaaaaacc
cggggagagatcaaattagccggggccgttacctcatttgcacaccgaaccacaaagaat
ggcaagccctttggcacgctaagcctggaagattaccagggcggacacaccttctttctg
ttcggtgaagattacgtcaagttcaagcagtatttcatgaccggatggttcctgtatatt
tccggctcagtccatcccaataaatacaaaccgggcgaatttgaattcaagatcaaccaa
atcgtactactaaacgaaatccggggaagaatgatcaagggagtacgcgtacacatagac
ctggacgacctaagtctggacctgatggaaaaactggaatcaatcacccaaaaataccag
ggcgaggccaaactctatatcaatatcatcgacaacaaagaaaatataaccttggatctc
atgtcctcaaaataccgcatagatccttcgaatgaactaatccaggccctggaacagttg
ccggaggtggcctataaaatcatctag
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integrated database retrieval system
