Cyclobacterium xiamenense: ABWH99_04745
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Entry
ABWH99_04745 CDS
T10772
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cxi Cyclobacterium xiamenense
Pathway
cxi03410
Base excision repair
cxi03430
Mismatch repair
cxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABWH99_04745 (recJ)
03430 Mismatch repair
ABWH99_04745 (recJ)
03440 Homologous recombination
ABWH99_04745 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cxi03400
]
ABWH99_04745 (recJ)
DNA repair and recombination proteins [BR:
cxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABWH99_04745 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABWH99_04745 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABWH99_04745 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XHC46816
LinkDB
All DBs
Position
complement(1116817..1118517)
Genome browser
AA seq
566 aa
AA seq
DB search
MDFRWKLKQKAREETVERLSTDINVNPTLANMLVNRGIADFQQAKDFFRPDLDKLHDPMR
MKDMDRAVNRLVNAITKNEQILVYGDYDVDGTTSVAMFYSFLTAFYPHVAFYIPDRYKEG
YGISEKGVRFAAENNFKLLVSLDCGIKALDKIDLANNLGVDCIVCDHHTPGEQLPNAIAV
LDPKRKDCSYPYKELSGCGVGFKLVQAFSEFTGRNQAELYSYLDLLAISIASDIVPITGE
NRILAYYGLDRLNNNPRPGIKALIRKGKVEKEIDITDIVFKIGPRINASGRLEHAKASVE
LLIANSLDEGVRRAELVEDVNSARKNFDENITREALEMIEAREQNGNFKSTVLFKEDWHK
GVIGIVASRCIEKYYRPTIILTESNNKATGSARSVFDFDIYEAISACSDLLEQFGGHKYA
AGLTLSVENVPAFQEKFETIVSQRVSDIHLKPVLEIDDELMLDQINYRFYNILKQMAPFG
PGNPEPVFCANQVHAENVRILKDKHLRFEIIQDGQNTRPVCIGFGFAKYYELLNSKMRFN
IAFEIRENTFRNTSSLQLYVKDIKFD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggattttagatggaaacttaaacaaaaggcgagggaagagaccgtcgaacgcctgagt
accgatatcaacgtaaacccaacccttgcaaacatgctggtcaaccggggcatcgcggat
tttcagcaagccaaggacttttttcgaccggatctggacaaactccacgatcccatgcgc
atgaaggatatggatcgggcggtaaaccgactcgtcaacgccatcactaagaacgaacag
attttggtttacggtgattacgatgtagatgggaccacttcagtcgccatgttttacagt
tttctcaccgctttctacccccatgtggccttttacatcccggatcggtacaaggaaggg
tacggaatttcagaaaaaggcgtgcgatttgcggcagaaaacaatttcaagctcctggtt
tcactggactgtggtatcaaagccctggataaaatcgatctggccaacaacctgggggta
gactgcatcgtctgcgatcaccacacaccgggagaacaacttcccaatgccatcgctgta
ttggaccccaagcgcaaggattgttcctatccctacaaagaattgagtggctgcggggta
ggttttaaacttgttcaggctttctcggaattcaccggtaggaatcaggccgaactctat
tcctacctggacctgctggccatcagcatcgcttcggatatcgtgcccattaccggagaa
aaccgcattctcgcgtactatggcctggaccgcctcaacaacaacccaaggcccggaatc
aaagcgctaatacgtaaaggcaaagtagaaaaggaaatcgacatcaccgacattgtgttt
aagatcggtcctaggatcaacgcttccggtcgactggaacatgccaaagcatccgtggaa
ctactgattgccaatagcctggacgaaggcgtacgaagggccgagttggtagaagatgtt
aacagtgcccgaaaaaatttcgacgaaaacatcactcgggaagcattggaaatgatagag
gcccgggaacaaaacggcaatttcaaaagtaccgtgcttttcaaagaggattggcacaaa
ggcgttatcgggattgttgcctccagatgcattgaaaaatactaccggccgaccatcatc
ctgaccgaatccaacaataaagccactggcagtgcccgttccgtttttgactttgatatt
tacgaagcaatttcggcttgcagtgatttactggagcaatttggtggacacaaatacgct
gccgggcttacgttgtccgtcgaaaacgtccctgccttccaggaaaagtttgaaacaatc
gtcagccaacgggtcagtgacattcacctgaaacccgttctggaaatcgacgatgagctg
atgttggatcaaatcaactaccggttttacaacattctgaagcaaatggctccctttggt
ccgggcaatccggagcctgttttttgtgcaaaccaggtacacgccgaaaacgtacggatt
ttaaaagacaagcacctgcggttcgaaatcattcaggacgggcaaaatacccgcccggta
tgcattggcttcggatttgctaagtactacgagttgctaaacagcaaaatgcgttttaat
atcgcattcgaaatacgggagaacacctttcgcaacacaagcagcctgcaattgtacgta
aaggacatcaaatttgactaa
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