Cyclobacterium xiamenense: ABWH99_05635
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Entry
ABWH99_05635 CDS
T10772
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
cxi Cyclobacterium xiamenense
Brite
KEGG Orthology (KO) [BR:
cxi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cxi01002
]
ABWH99_05635
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cxi01011
]
ABWH99_05635
Peptidases and inhibitors [BR:
cxi01002
]
Cysteine peptidases
Family C82
ABWH99_05635
Peptidoglycan biosynthesis and degradation proteins [BR:
cxi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ABWH99_05635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
XHC46985
LinkDB
All DBs
Position
complement(1307046..1308755)
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AA seq
569 aa
AA seq
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MSPCCSLRYFLFYLISGMTGSLLLLAGGSALSKTSPVAQEIRFLLERDASQTHPGFSHAP
LHGKSHLLTFYSERAFEPAWSSGQQPTCEAMELRQLIRLAGIDGLLPEDYHLAAVNMLMN
RFFETGLLSAGELALLDVLLSDAFVSFAHHLHHGKIHPEHLNGIWNIQTKRDEPRVLEKL
NRALATKKVREELHSLRPKFPVYDRMRASMKKYAELAKRYPDQNQPLSTNDKPLEIGERN
PIVPFIRERLILWQDLNVYSIAPDDEDLYDRTLAMGVVSFQQRNGLQADGAIGRATLEAL
NHNSETLMEKLAVNMERLRWLPDTTLQEFILVNIAGYSMDFISKQDTLLHSNAIVGKSYR
KTPVFNAAMSYLVFSPTWTIPPTILKNDVLPSVRKNSAYLAEKNMRVLDHSGNTIDPHTI
NWEKISGPDFPYLIRQEPGPSNPLGSVKFMFPNEYDVYIHDTPSKELFYREDRALSSGCI
RIQKPYELAQLLLNDQPLWTDERIRSAMQQNQEQLVQLNRKIPVIILYLTCWTDSNRREN
IRKDIYNRDAELLKRMRRPLLENRSGSEN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtccctgctgtagtttgcgatatttcctgttctacctgatttccggcatgacggga
agtctgctgctactcgcagggggctccgctttgtccaaaacttcccccgtcgcccaggaa
attcgctttcttcttgagcgagacgcatcacaaacccatcccggtttttcacacgctccc
ctacatggcaaatctcatttgctgacattttactccgaacgggcctttgaacccgcctgg
tcttccgggcagcagccaacctgtgaggcaatggaattgaggcaattgatacgccttgcc
gggattgacggtttgctaccggaagattaccaccttgccgctgtcaatatgctcatgaac
cgattttttgaaaccggacttctttcagcgggggaactcgcgctgctcgatgttctcctt
agcgatgcatttgttagctttgctcatcatctccaccatgggaaaatacatcccgaacac
ctgaacggcatctggaacatacaaaccaagcgagacgaaccgcgggtattggagaaattg
aaccgtgcccttgctaccaaaaaggtacgggaagaattacatagcctccgcccaaaattt
cccgtctacgaccgaatgcgtgcatccatgaagaagtacgcagaattggccaagcgatac
cccgatcaaaatcagccgctttccaccaacgacaagccgctggaaatcggtgaaaggaat
ccgatcgttccttttatccgcgaaaggttaattttatggcaagacctgaacgtctattca
atagccccagatgatgaagacctgtatgaccgtacactcgcaatgggagtggtaagcttc
caacaaagaaacggactccaggcagatggggctattggaagggctacgcttgaagcactc
aatcacaattccgaaaccctgatggaaaagctggcggtaaatatggaacgtcttcgctgg
ctcccggacaccacgcttcaagagttcattttggtaaatattgctggatattccatggat
ttcattagcaagcaggacaccctgctacactccaacgccattgttgggaaatcctatcgg
aagactccggtttttaatgcagccatgagttacctggtcttcagccccacctggaccatc
cctccgaccattttgaaaaacgacgtgctaccgtcggtacgaaaaaacagcgcatacctg
gccgagaaaaacatgcgggtcctggaccattccggaaacacaatcgatccccataccatc
aactgggaaaaaatatcgggacctgactttccctaccttatccgacaagagcccggacca
tccaatcctctggggtcggtcaagttcatgtttcccaatgaatacgacgtgtacattcac
gataccccttcaaaggaattgttctaccgggaagaccgggcgctcagttccggatgcatc
cgcatccaaaaaccctatgagttagcccaactcttgttaaacgatcaaccgctatggacc
gatgaacgcattcgaagcgccatgcagcaaaaccaagagcagctggtgcaattaaacaga
aaaatcccggtcattatcctttacctgacctgctggacggattcaaaccgccgggaaaac
atacgcaaggatatttataaccgagatgctgaacttttaaaacggatgcgccgaccgcta
ctggaaaaccggtcaggaagcgaaaactga
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