Cyclobacterium xiamenense: ABWH99_05640
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Entry
ABWH99_05640 CDS
T10772
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
cxi Cyclobacterium xiamenense
Pathway
cxi00541
Biosynthesis of various nucleotide sugars
cxi01100
Metabolic pathways
cxi01250
Biosynthesis of nucleotide sugars
Module
cxi_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
cxi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ABWH99_05640 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cxi01005
]
ABWH99_05640 (kdsA)
Enzymes [BR:
cxi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
ABWH99_05640 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
cxi01005
]
Lipid A
ABWH99_05640 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
XHC46986
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All DBs
Position
complement(1308752..1309600)
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AA seq
282 aa
AA seq
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MSEPTHTMRIGESLILGADRPVLFSGPCAVESKEICLEIGSTVKTQAQKHGFDYVFKASF
DKANRTSGSSFRGIGFERSLNVLQEVGEALQLPLVTDVHESYQVEAVAAVVDVIQIPAFL
CRQTDLLLAAGKSGKAIKIKRGQFMAPEDMQFAVDKIRSTGNPNVCLTERGFSLGYHNLV
VDMRALPIMRQFAPVVFDVTHSVQQPGANQGSSGGQRQMAPYLARAAAAAGVDGFFIETH
PEPSKALSDGPNMIPLGTMDAFLGMIKEAWKIGNRYRNFPLV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacctacccataccatgcgcataggcgaatccctgatactgggagcggacagg
ccagtgttgttttctggcccctgtgctgtggaaagcaaggagatctgcctcgaaattggt
agcacagtcaaaacccaggcacaaaaacatggatttgactatgtgtttaaagcctctttt
gataaggccaaccgcacctccggaagttcatttcgggggattggattcgagcgatcccta
aacgtgctgcaggaagtaggagaagcgctccagcttcctctggtaacagatgttcacgaa
agctaccaagtagaagccgtcgccgcagtggtggacgtgatacagataccggcttttcta
tgcaggcaaacggaccttttacttgccgccggaaaatccggtaaagccatcaaaattaaa
cgcggccaattcatggccccggaagacatgcagttcgctgtggataaaatacggtctacc
ggtaaccccaatgtatgcctgaccgaaagggggttttccctgggctatcacaacctggta
gtagacatgcgcgcacttcccatcatgcgtcaatttgctcccgtagttttcgatgtcacg
cacagcgttcagcaaccgggggccaatcagggcagcagcgggggacagcgacaaatggcc
ccctaccttgcccgggcggcggcagcggctggagtggacggtttttttattgaaacccat
ccagaaccctcaaaggccctgagcgacgggccgaacatgatccctctcggaaccatggat
gccttcctcggcatgatcaaagaagcctggaaaatcggaaatcgttaccgaaattttcct
ttggtatga
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