Cyclobacterium xiamenense: ABWH99_09265
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Entry
ABWH99_09265 CDS
T10772
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cxi Cyclobacterium xiamenense
Pathway
cxi03018
RNA degradation
Brite
Enzymes [BR:
cxi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABWH99_09265
Messenger RNA biogenesis [BR:
cxi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABWH99_09265
DNA repair and recombination proteins [BR:
cxi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABWH99_09265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XHC47676
LinkDB
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Position
2172003..2173925
Genome browser
AA seq
640 aa
AA seq
DB search
MDELKTLALATLKRYFGYLDFRPLQEEIVLHAAQGNDGLALMPTGGGKSICFQVPALMRP
GICLVISPLIALMKDQVDQLKNRGIKALAVHSGMQKREIDTLLDNCVYGDYKFLYLSPER
LKTELFIERVKQMKVNLVAVDEAHCISQWGYDFRPSYLEIVKIRELLPGVPVLALTASAT
LSVREDITEKLALRPGKVFVQSFARKNLSYAVRWVENKLEKAVEILQKVPGSAIVYHRTR
KGTKETAQHLLQLGISATFYHAGLEQPVRTQRQQDWIQGKVRVMVATNAFGMGIDKPDVR
LVVHLDVPESLEHYYQEAGRAGRDGIRAYAVLLVREQDCRELTQRAAEAYPPEDQIKRVY
QCLANYYRLAVGSAEMSSFDFDFGNFTQTYSLDMKMAYNAIKVLQEVDLLLFSESVFMPS
SLHFLVSQTKIYEAQIAYARLDPLIKLLLRMYGGELFVNYVRIQEGRIGQLLNLPEKEVV
GMLRRLDELGLAAYTAKKDKPQVTFLTPRLDAGRLPLDKKRIGQRREQASEKAARMVAYA
KNEKSCRTSLILDYFGEKNDFTCGICDTCIQKKKENALSEHHKRLESKILKTLAGGEAFS
LKVLLAQCGEEPDDFSVGVLRELEDAGVIYTAENGKIRLK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattgaaaacacttgcactggctaccttgaagaggtattttggctaccttgat
tttcggcctttgcaggaagagattgtattgcacgctgcgcagggaaatgacgggttggcg
ctgatgcctaccggcgggggaaaatccatctgcttccaggtaccggcgttgatgcgtcct
ggtatttgcttggtaatcagtccactgatagcgctgatgaaggatcaggtggaccagctt
aaaaaccgggggatcaaagcgctcgccgtgcattcgggcatgcaaaaaagagagattgac
accttacttgataattgtgtgtatggggactataagtttttgtacctgtctccggaacgg
ttaaagaccgaactattcattgagcgggtcaagcagatgaaggtgaatctggtcgccgtg
gacgaagcccactgcatttcccagtggggatacgattttcgtccctcgtacctggagatt
gtgaaaatccgcgagcttctccccggtgtgccggtactggcccttactgcttcagccacc
ctttcggtccgggaggacattaccgagaagcttgccctgcggccgggtaaggtattcgtt
cagtcttttgccagaaaaaacctttcctatgcggtccgatgggtggagaataagctggaa
aaggcggtagaaattcttcagaaggttccgggaagtgccattgtgtaccaccgaacccga
aagggtaccaaggaaacagcgcagcacctgctgcaattggggatttcagccaccttttac
catgccggcctggaacagccggtcagaacccaacgccaacaggattggattcagggtaag
gtacgcgtcatggtagcgaccaatgcatttggcatggggatcgataagccggacgtacgg
ctggtcgtgcatttggatgtacccgagagcctggagcactactaccaggaagcgggtagg
gcaggcagggacggcatccgggcttatgcagtattactggtgcgggaacaagactgtcgg
gaactaacccaacgtgcagcggaagcgtatccgcccgaagaccagatcaagcgggtgtac
caatgcctggccaattattacaggctggcagtagggagtgccgagatgagcagttttgat
tttgatttcggcaactttacacaaacttattcgctggacatgaaaatggcctacaatgcg
atcaaagtgctgcaggaggtggacctgctgctattttctgaaagtgtattcatgccttct
tcgcttcattttctcgtgtcccagaccaaaatttacgaagcacaaattgcctatgccagg
ctggatccattgatcaaactgcttctcagaatgtacggtggcgagctttttgtcaactac
gttcgcatacaggaaggtcgaatcggtcagctcttaaaccttccggagaaggaagtagtc
ggcatgcttcggcgcctggacgaactgggattggcggcgtataccgcaaagaaggacaag
ccacaagttacctttctgaccccaagattggatgcaggcagactaccgttggataaaaag
cgcatcgggcagcgcagggagcaggcttctgaaaaggccgcgcgaatggtcgcctatgca
aaaaatgaaaaaagttgccgtacctcccttattttagattattttggggaaaagaatgat
tttacctgcgggatttgcgatacctgtattcaaaagaagaaggaaaatgccctttcggag
caccataaacggctggaaagtaaaatactcaaaaccttagcagggggagaagcgttctct
ttgaaagtcctgcttgctcaatgtggcgaggagcccgatgacttctcggtgggggtgctt
cgcgaactggaggacgcaggggtcatttacaccgctgagaacggaaaaatacgactaaaa
tga
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