Cyclobacterium xiamenense: ABWH99_09570
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Entry
ABWH99_09570 CDS
T10772
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cxi Cyclobacterium xiamenense
Brite
KEGG Orthology (KO) [BR:
cxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cxi03009
]
ABWH99_09570 (rimO)
Enzymes [BR:
cxi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABWH99_09570 (rimO)
Ribosome biogenesis [BR:
cxi03009
]
Prokaryotic type
ribosomal protein modification factors
ABWH99_09570 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XHC47736
LinkDB
All DBs
Position
2234027..2235352
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AA seq
441 aa
AA seq
DB search
MKARTLKKDKVNIVTMGCSKNLVDSEVLLSQLRGNGIDARHESNAGDHNIVIINTCGFID
NAKQELINTILEYAQAKEQGLVDKVYVTGCLSQRYKDELEVEIPQVDAFFGTRDLPALLK
KFKADYKHELVGERLLTHASHYAYMKISEGCDRPCSFCAIPLMRGGHVSRPIEELVQEAR
HKAANGTRELLLIAQDSTYYGLDLYKKRRLADLLRALSDVEGIDWIRLHYAYPTGFPLEV
LDVMAERENICNYLDIPLQHGSSAVLKAMRRGTSREKQEALIWQIRERVPGIAIRTTLIA
GHPGEGEREFEEMMDFVQRMRFDRLGVFTYSHEENTHAYSLPDEVPAEVKQERANRLMAV
QEQISFELNQEKIGKTFQVLIDKKEGGYFVGRTAYDSVEVDNEVLIDAGSQYCRIGDFVR
VRIREATEFDLYGEVVQARPE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagaaccttaaaaaaagacaaagtcaatatcgtcaccatgggctgttccaaa
aacctggtggattccgaagtattgctgagccagcttcggggaaacggcattgacgcccgt
cacgaatccaatgccggggaccataacatcgtcattatcaatacctgcggttttatcgac
aatgccaagcaggaattgatcaataccatcctggagtatgcgcaggccaaggagcaggga
ttggtcgacaaggtctacgtcaccgggtgcctctcgcagcgatacaaggacgagctggag
gtagaaattccccaggtggatgcctttttcggcaccagggatttgccggccttattgaag
aagtttaaagccgactacaaacacgaactggtaggggagcgcctgctcacgcatgcttcc
cactatgcctacatgaagatttcggagggttgcgatcgtccctgctccttctgcgccatt
cccttgatgcgcggagggcacgtgtcgcgccccatcgaggagttggtccaggaagcccga
cacaaggccgccaacggtacccgggaactgctgctgatcgcccaggactctacctattac
gggctggacctgtacaagaaaaggcgcctggccgacttgctgcgggcgctttccgatgtg
gaaggcatcgattggatccgcctgcactatgcctaccccaccggctttcccctggaggtg
cttgacgtgatggcagagcgggagaatatctgcaattacctggacattcccctgcaacac
ggatccagcgcggtgctgaaagccatgcgaaggggtaccagccgggagaagcaggaagcc
ctgatctggcagatccgcgagcgcgtacccggtattgccattcgcaccaccctgatcgcc
gggcaccccggagaaggggagcgggaatttgaggaaatgatggactttgtgcagcgtatg
cgtttcgatcgactgggcgtttttacctattcccacgaggaaaatacccatgcctacagc
ttgcccgacgaggtgccggccgaggtgaagcaggagcgggcgaatcggctgatggcagta
caggaacagatttccttcgagctcaaccaggaaaaaatcggaaaaacctttcaggtgttg
atcgataaaaaggaaggagggtattttgtgggccgaacggcctacgattccgtggaggtg
gataacgaggtattgatcgacgccggcagccagtattgccggatcggtgactttgttcgg
gtccggattcgggaggccaccgaatttgacctgtacggggaggtagtccaggcccgtccg
gaataa
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