Cyclobacterium xiamenense: ABWH99_11825
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Entry
ABWH99_11825 CDS
T10772
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cxi Cyclobacterium xiamenense
Brite
KEGG Orthology (KO) [BR:
cxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cxi03016
]
ABWH99_11825 (truB)
Enzymes [BR:
cxi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABWH99_11825 (truB)
Transfer RNA biogenesis [BR:
cxi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABWH99_11825 (truB)
Prokaryotic type
ABWH99_11825 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF3563
Motif
Other DBs
NCBI-ProteinID:
XHC48174
LinkDB
All DBs
Position
complement(2826480..2827169)
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AA seq
229 aa
AA seq
DB search
MAPHEQAYGEVFLVNKPYRWTSFDVVKKLRNALKVKKIGHAGTLDPLATGLLIICAGKET
KNIEHYQAQEKEYEGSFVLGKTTDSYDLEQEIRDVSDPSFLTETAIIQAAQSLTGDILQV
PPAHSAIKKDGKRVYESARKGITVHLDARPVTVNSFVITKICLPEIQFHIRCSKGTYIRS
LARDIGELLGVGAYLSALKRTAIGDFRLENAWELDDLIDKIYKKRNEDL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcatgaacaggcatatggggaggtttttttagttaataaaccgtatcgatgg
acctctttcgacgtggtaaaaaaacttcgaaatgccctaaaggtcaaaaaaataggacac
gcaggtacacttgaccccctggcgaccggtctactgatcatctgtgcggggaaagaaaca
aaaaacattgaacactaccaggcccaggaaaaggagtacgaaggtagcttcgtcttagga
aaaaccaccgattcctacgacttggagcaggaaattagggatgtatccgacccatcgttc
ctaactgaaacagctatcatacaagcagctcaatcgctgactggcgacattctacaagtt
ccgcccgcccactcggctataaagaaggatggaaaaagggtatacgagtcggcgagaaaa
ggcatcacggttcatctggatgcccgcccggttaccgtaaatagtttcgttattacgaag
atatgcttgccggaaattcagtttcacattcgctgttccaaaggcacctacatccgtagt
ctggcacgtgacatcggcgaactgctcggtgtaggagcgtatttgtccgcattaaagcga
acggcaataggggatttccggcttgagaatgcctgggaattggacgatttgatcgataaa
atctacaagaagcgaaatgaagatttatag
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