Cyclobacterium xiamenense: ABWH99_17640
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Entry
ABWH99_17640 CDS
T10772
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cxi Cyclobacterium xiamenense
Pathway
cxi03030
DNA replication
cxi03430
Mismatch repair
cxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWH99_17640
03430 Mismatch repair
ABWH99_17640
03440 Homologous recombination
ABWH99_17640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cxi03032
]
ABWH99_17640
03400 DNA repair and recombination proteins [BR:
cxi03400
]
ABWH99_17640
Enzymes [BR:
cxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWH99_17640
DNA replication proteins [BR:
cxi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABWH99_17640
DNA repair and recombination proteins [BR:
cxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABWH99_17640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XHC44740
LinkDB
All DBs
Position
4332448..4333251
Genome browser
AA seq
267 aa
AA seq
DB search
MKLNLKSPIAFFDLEATGINISTDRIVEISILKLFPEGQKELKTMKLNPTVPIPPESSLI
HGIYDKDVADAPTFKDVARELFRFFEGADLAGFNVLKYDIPLLVEEFLRAGIDFDVEKRN
LLDAQKIFFMMEKRNLASAYKFYCGKVLENAHSAEADTLATYEVFKAQIARYAGEEMEDL
QGNRVGVLENDMKKIHHLINEKMVDLAGRFVFNDKGEECFNFGKQKGKPIAQVLKEEPGY
YDWMMKGDFPLDTKRKLTQVKLRGFNS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatttaaaatctcccattgcttttttcgacctcgaagccaccggcatcaac
atttctacggatcgaatcgttgaaatttctattttaaaattgtttcctgaggggcaaaaa
gaactcaagaccatgaaattaaatccaacggtgcccattcctccggaatcttcactgatc
catggtatttacgacaaagatgtggccgacgcaccgacgtttaaagacgtagcacgtgaa
ttgttccggttttttgagggcgccgatttggcggggtttaacgtgctgaaatacgacatc
cccctgctggtagaggagtttttgcgtgcgggcattgattttgacgtagagaaaagaaat
ctgctggatgcacaaaaaatatttttcatgatggaaaaaagaaatctggcatccgcttac
aaattttactgtggaaaggtattggaaaatgcgcacagtgcagaagcggataccctggct
acctacgaagtttttaaagcccaaattgcccggtatgccggggaggaaatggaggacctg
caaggaaatcgggtgggagttttggaaaacgacatgaaaaaaatccaccacttgatcaat
gaaaaaatggtcgacctggcgggaaggttcgtgttcaacgacaagggagaggaatgcttc
aattttggcaaacaaaagggcaagcccatcgcacaggtattaaaagaagagcctggctat
tacgattggatgatgaaaggagactttcccctggacaccaaacgaaaactcacccaggta
aagctccgggggtttaatagctga
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