Cyclobacterium xiamenense: ABWH99_19745
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Entry
ABWH99_19745 CDS
T10772
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cxi Cyclobacterium xiamenense
Brite
KEGG Orthology (KO) [BR:
cxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cxi03016
]
ABWH99_19745 (miaB)
Enzymes [BR:
cxi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
ABWH99_19745 (miaB)
Transfer RNA biogenesis [BR:
cxi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
ABWH99_19745 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
XHC45137
LinkDB
All DBs
Position
4852411..4853871
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AA seq
486 aa
AA seq
DB search
MENIIKDIDIIREEEDKSCDVAITAEESTGGTKKLYIESYGCQMNFSDSEIVASIMKDNG
FDTTSDFRTADVIFLNTCSIREKAEQTVRKRLSQFNQVKSEKPELTIGVLGCMAERLKEK
LLEEEKLVDLVVGPDAYRDLPNLVGQAEEGSKGVNTFLSREETYADISPVRLNSNGVSAF
ISIMRGCDNMCSFCVVPFTRGRERSRDPHSIVNEARELFQRGYKEVTLLGQNVDSYKWSA
EENNKARLNKKETVLSEVIHFSDLLEMVARIDPRLRVRFSTSHPKDITDEVLLTMKRYDN
ICKYIHLPVQSGNSRILALMNRTYDREWYLDRVRKIREILGEDCGISSDMIAGFCSETES
EHQDTLSMMDLVQYDFSYMFYYSERPGTLAAKKLADDVPLETKKRRLQEIIEKQNQLSLM
RNQRDIGTVQEILIEGQSKRSAEQLKGRNSANKVVIVAAGGLQIGDYVQVRITDCSSATL
FGEVTD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacataattaaagacatcgatatcatccgggaggaggaggacaaaagctgtgac
gtagcaatcactgcggaagaaagtaccggaggaacaaaaaaattgtatatagaaagttac
ggttgtcagatgaatttttcggacagcgaaatcgtcgcttccattatgaaggacaatggg
tttgataccacatctgatttcaggactgcggatgtgattttcttaaatacctgttcgata
cgggaaaaagccgagcagacggtacgaaagcgcctcagccaattcaatcaggtaaagtcc
gaaaagccggaacttaccatcggggtattgggatgtatggccgaacggctgaaggaaaaa
ttactcgaggaggaaaaactggtcgaccttgtggtagggccggatgcctaccgggacctg
cccaatctggtgggacaggcagaagaaggaagcaaaggagtaaatacctttttatcaaga
gaagaaacctacgcggatatttctccggttcggctgaattccaacggagtctcggctttt
atttccatcatgaggggctgcgacaacatgtgttctttctgcgtggttccctttacccgg
ggtcgcgaaagaagccgggaccctcattccatcgtgaacgaagcccgagaactgtttcaa
cgaggatacaaggaggtcacgcttttggggcaaaatgtcgacagttacaaatggtcggca
gaagaaaataacaaggcccgtttgaacaaaaaagagacagtactgtccgaagtgattcat
ttttcagatttactggaaatggttgcccgtattgatccccgactacgggtacgtttttcc
acctctcaccccaaggatatcacggacgaggtactgctgacgatgaaacggtacgacaat
atttgcaagtacattcatttgccggttcaaagtggtaattcgcgtatattggcgctgatg
aaccgtacctacgaccgggaatggtatctggatcgggtacggaaaattcgtgaaattctg
ggagaagattgtggcatctcctcggacatgattgcgggtttttgttcggaaacggaatcg
gaacaccaggatacgttgagcatgatggacctggtccagtacgatttctcctacatgttt
tactactcggaacgacccggaacccttgccgccaaaaagctagcggacgatgtgcctctg
gaaacgaaaaaacggcgactgcaggaaatcattgaaaaacaaaatcaactttccttgatg
cgtaaccaacgagacattggcaccgtgcaggaaattttaatcgaaggtcagtccaaacgc
tccgccgaacaattgaaaggaagaaattcagcgaataaggtggtgattgttgctgcggga
gggttacaaattggcgattacgtacaggtacggattacggattgctcctcagccacgtta
tttggagaagtcaccgactga
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